OMP ST:71061 ! Escherichia coli K-12 BW25113 ispE::SPA-kan

Strain Summary

Strain Name	Escherichia coli K-12 BW25113 ispE::SPA-kan
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 ispE::SPA-kan
Strain Reference	PMID:21185072
Strain availability
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:37358		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27557 Genotype differences: +lacZ4787(del)( +ispE -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:A22	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:2830968) A22	chemical concentration= 0.5 ug/ml normalized fitness= -3.72
OMP_AN:37359		OMP:0007903	decreased resistance to bile acids	Relative to: OMP_AN:27585 Genotype differences: +lacZ4787(del)( +ispE -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cholate sodium hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:23679061) Cholate sodium hydrate	chemical concentration= 0.1 % normalized fitness= -3.36
OMP_AN:37360		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27509 Genotype differences: +lacZ4787(del)( +ispE -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cisplatin-cis-Diamineplatinum(II) dichloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:27899) Cisplatin-cis-Diamineplatinum(II) dichloride	chemical concentration= 100 ug/ml normalized fitness= -3.86
OMP_AN:37361		OMP:0007250	increased resistance to a chemical	Relative to: OMP_AN:27570 Genotype differences: +lacZ4787(del)( +ispE -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Propidium iodide	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:51240) Propidium iodide	chemical concentration= 50 ug/ml normalized fitness= 3.4
OMP_AN:37362		OMP:0006041	increased resistance to quinolone	Relative to: OMP_AN:27542 Genotype differences: +lacZ4787(del)( +ispE -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Norfloxacin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:100246) Norfloxacin	chemical concentration= 0.04 ug/ml normalized fitness= 3.41
OMP_AN:37363		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27551 Genotype differences: +lacZ4787(del)( +ispE -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Rifampicin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:28077) Rifampicin	chemical concentration= 2 ug/ml normalized fitness= -3.74
OMP_AN:37364		OMP:0006063	increased resistance to tetracycline	Relative to: OMP_AN:27524 Genotype differences: +lacZ4787(del)( +ispE -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Tetracycline hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:35006) Tetracycline hydrochloride	chemical concentration= 1 ug/ml normalized fitness= 3.58
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References

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