OMP ST:71037 ! Escherichia coli K-12 BW25113 ispA::SPA-kan

Strain Summary

Strain Name	Escherichia coli K-12 BW25113 ispA::SPA-kan
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 ispA::SPA-kan
Strain Reference	PMID:21185072
Strain availability
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:37353		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27559 Genotype differences: +lacZ4787(del)( +ispA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Actinomycin D	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:27666 CID:457193) Actinomycin D	chemical concentration= 10 ug/ml normalized fitness= -3.82
OMP_AN:37354		OMP:0007903	decreased resistance to bile acids	Relative to: OMP_AN:27587 Genotype differences: +lacZ4787(del)( +ispA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Bile salts chemical-Mixture of sodium cholate (CHEBI:26711) and sodium deoxycholate (CHEBI:9177)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:26711 + CHEBI:9177) Bile salts chemical-Mixture of sodium cholate (CHEBI:26711) and sodium deoxycholate (CHEBI:9177)	chemical concentration= 2 % normalized fitness= -3.38
OMP_AN:37355		OMP:0006040	decreased resistance to quinolone	Relative to: OMP_AN:27543 Genotype differences: +lacZ4787(del)( +ispA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Streptonigrin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:9287) Streptonigrin	chemical concentration= 0.1 ug/ml normalized fitness= -4.23
OMP_AN:37356		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27565 Genotype differences: +lacZ4787(del)( +ispA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Polymyxin B sulfate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:8310) Polymyxin B sulfate	chemical concentration= 4 ug/ml normalized fitness= -4.56
OMP_AN:37357		OMP:0006057	decreased resistance to aminoglycoside	Relative to: OMP_AN:27527 Genotype differences: +lacZ4787(del)( +ispA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Spectinomycin dihydrochloride pentahydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate	chemical concentration= 6 ug/ml normalized fitness= -3.75
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References

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