OMP ST:941 ! Escherichia coli K-12 JW0452
Contents
[hide]Strain Summary
| Strain Name |
Escherichia coli K-12 JW0452 |
|---|---|
| Synonyms |
BW25113 acrA748(del)::kan, ECK0457 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 acrA748(del)::kan |
| Strain Reference |
|
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | not | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:1010 |
OMP:0007250 |
decreased sensitivity to a chemical |
Relative to: OMP_AN:1009 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:triton X 0.01% |
CHEBI:9750 triton X |
fitness score = -3.31 | ||||
|
OMP_AN:1012 |
OMP:0005276 |
decreased resistance to organic heterocyclic compound |
Relative to: OMP_AN:1011 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:nalidixic acid (1.5 ug ml-1) |
CHEBI:100147 nalidixic acid |
fitness score = -3.05 | ||||
|
OMP_AN:702 |
OMP:0007362 |
Increased resistance to a nucleoside |
Relative to: OMP_AN:701 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:tunicamycin (7.5 ug ml-1) |
CHEBI:29699 tunicamycin |
fitness score = 5.05 | ||||
|
OMP_AN:704 |
OMP:0006041 |
increased resistance to quinolone |
Relative to: OMP_AN:703 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:doxorubicin (1.0 ug ml-1) |
CHEBI:28748 doxorubicin |
fitness score = 4.41 | ||||
|
OMP_AN:706 |
OMP:0007174 |
increased resistance to antimicrobial peptide |
Relative to: OMP_AN:705 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:vancomycin (50 ug ml-1) |
CHEBI:28001 vancomycin |
fitness score = 4.33 | ||||
|
OMP_AN:710 |
OMP:0006058 |
increased resistance to aminoglycoside |
Relative to: OMP_AN:709 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:amikacin (0.1 ug ml-1) |
CHEBI:2637 amikacin |
fitness score = 3.87 | ||||
|
OMP_AN:712 |
OMP:0006045 |
increased resistance to beta-lactam compound |
Relative to: OMP_AN:711 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:ampicillin (1.0 ug ml-1) |
CHEBI:28971 ampicillin |
fitness score = 3.76 | ||||
|
OMP_AN:713 |
OMP:0007377 |
resistant to alkaloid |
Relative to: OMP_AN:685 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:MMS (0.05%) |
CHEBI:25255 MMS |
fitness score = 3.11 | ||||
|
OMP_AN:715 |
OMP:0007249 |
Increased sensitivity to a chemical |
Relative to: OMP_AN:714 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:propidium iodide (1 ug ml-1) |
CHEBI:51240 propidium iodide |
fitness score = 3.25 | ||||
|
OMP_AN:717 |
OMP:0007174 |
increased resistance to antimicrobial peptide |
Relative to: OMP_AN:716 Genotype differences: +acrA748(del) Condition differences: no differences |
medium:indolicidin (0.1 ug ml-1) |
CHEBI:80180 indolicidin |
fitness score = 3.38 |
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- Jump up ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ Jump up to: 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 2.21 2.22 2.23 2.24 2.25 2.26 2.27 2.28 2.29 2.30 2.31 2.32 2.33 2.34 2.35 2.36 2.37 2.38 2.39 2.40 2.41 2.42 2.43 2.44 2.45 2.46 2.47 2.48 2.49 2.50 2.51 2.52 2.53 2.54 2.55 2.56 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
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- OMP:0000335 ! decreased resistance to aminopyrimidine
- OMP:0005078 ! increased resistance to alkaline pH stress
- OMP:0005114 ! increased resistance to SDS-EDTA stress
- OMP:0005276 ! decreased resistance to organic heterocyclic compound
- OMP:0005278 ! increased resistance to organic heterocyclic compound
- OMP:0006036 ! decreased resistance to macrolide
- OMP:0006040 ! decreased resistance to quinolone
- OMP:0006041 ! increased resistance to quinolone
- OMP:0006044 ! decreased resistance to beta-lactam
- OMP:0006045 ! increased resistance to beta-lactam compound
- OMP:0006058 ! increased resistance to aminoglycoside
- OMP:0006061 ! decreased resistance to tetracycline
- OMP:0006067 ! decreased resistance to chloramphenicol
- OMP:0007173 ! decreased resistance to antimicrobial peptide
- OMP:0007174 ! increased resistance to antimicrobial peptide
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007250 ! increased resistance to a chemical
- OMP:0007362 ! Increased resistance to a nucleoside
- OMP:0007363 ! decreased resistance to a nucleoside
- OMP:0007370 ! decreased resistance to an acridine
- OMP:0007377 ! decreased resistance to alkylating agent
- OMP ST:800 ! Escherichia coli K-12 BW25113 derivatives
