OMP ST:907 ! Escherichia coli K-12 AW574

From OMPwiki

Strain Summary

Strain Name

AW574

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

Lambda- araC14 fhuA31 gal+ glnX+ hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsx-78 xylA5

Strain Reference

PMID:4597449[1]

Strain availability
Ancestry
Annotated phenotypes




Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:625

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-aspartate (10 mM)
  • medium:Vogel-Bonner medium
ECO:0005609

capillary assay evidence

PMID:10940028[2]

CHEBI:17053 L-aspartate

OMP_AN:626

OMP:0006108

abolished chemotaxis

Relative to: OMP_AN:625


Genotype differences:

no differences


Condition differences:

medium:4-aminopyridine (10 mM)?

  • temperature:30C
  • medium:4-aminopyridine (10 mM)
  • medium:L-aspartate (10 mM)
  • medium:Vogel-Bonner medium
ECO:0005609

capillary assay evidence

PMID:10940028[2]

CHEBI:17053 L-aspartate CHEBI:34385 4-aminopyridine

4-aminopyridine is a Potassium channel blocker

OMP_AN:627

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:625


Genotype differences:

no differences


Condition differences:

medium:verapamil (10^-4 M)?

  • temperature:30C
  • medium:L-aspartate (10 mM)
  • medium:Vogel-Bonner medium
  • medium:verapamil (10^-4 M)
ECO:0005609

capillary assay evidence

PMID:10940028[2]

CHEBI:17053 L-aspartate CHEBI:9948 verapamil

Verapamil is a Calcium channel blocker

OMP_AN:628

OMP:0007053

increased positive chemotaxis

Relative to: OMP_AN:627


Genotype differences:

no differences


Condition differences:

medium:CaCl2 (300 uM)?

  • temperature:30C
  • medium:CaCl2 (300 uM)
  • medium:L-aspartate (10 mM)
  • medium:Vogel-Bonner medium
  • medium:verapamil (10^-4 M)
ECO:0005609

capillary assay evidence

PMID:10940028[2]

CHEBI:17053 L-aspartate CHEBI:9948 verapamil CHEBI:3312 CaCl2

Verapamil is a Calcium channel blocker

OMP_AN:629

OMP:0007053

increased positive chemotaxis

Relative to: OMP_AN:627


Genotype differences:

no differences


Condition differences:

medium:MgCl2 (30 uM)?

  • temperature:30C
  • medium:L-aspartate (10 mM)
  • medium:MgCl2 (30 uM)
  • medium:Vogel-Bonner medium
  • medium:verapamil (10^-4 M)
ECO:0005609

capillary assay evidence

PMID:10940028[2]

CHEBI:17053 L-aspartate CHEBI:9948 verapamil CHEBI:6636 MgCl2

Verapamil is a Calcium channel blocker



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. Tso, WW & Adler, J (1974) Negative chemotaxis in Escherichia coli. J. Bacteriol. 118 560-76 PubMed OMPwiki page
  2. 2.0 2.1 2.2 2.3 2.4 Tisa, LS et al. (2000) Effects of organic antagonists of Ca(2+), Na(+), and K(+) on chemotaxis and motility of escherichia coli. J. Bacteriol. 182 4856-61 PubMed OMPwiki page