OMP ST:71617 ! Escherichia coli K-12 JW0627

Strain Summary

Strain Name	Escherichia coli K-12 JW0627
Synonyms	JW0627-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 dacA771(del)::FRT-kan-FRT
Strain Reference	PMID:16738554 Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:28930		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27530 Genotype differences: +lacZ4787(del)( +dacA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Amoxicillin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:2676) Amoxicillin	chemical concentration= 1.5 ug/ml normalized fitness= -3.83
OMP_AN:28931		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27531 Genotype differences: +lacZ4787(del)( +dacA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Ampicillin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:28971) Ampicillin	chemical concentration= 8 ug/ml normalized fitness= -5.58
OMP_AN:28932		OMP:0007896	decreased resistance to a surfactant	Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +dacA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Benzalkonium chloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3020) Benzalkonium chloride	chemical concentration= 25 ug/ml normalized fitness= -3.52
OMP_AN:28933		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27534 Genotype differences: +lacZ4787(del)( +dacA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cefoxitin sodium hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3501) Cefoxitin sodium hydrate	chemical concentration= 1 ug/ml normalized fitness= -4.08
OMP_AN:28934		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27535 Genotype differences: +lacZ4787(del)( +dacA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cefsulodin sodium salt hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:31380) Cefsulodin sodium salt hydrate	chemical concentration= 18 ug/ml normalized fitness= -6.79
OMP_AN:28935		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27566 Genotype differences: +lacZ4787(del)( +dacA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Vancomycin HCl hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:9932) Vancomycin HCl hydrate	chemical concentration= 50 ug/ml normalized fitness= 3.99
OMP_AN:28936		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27536 Genotype differences: +lacZ4787(del)( +dacA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Ceftazidime hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3509) Ceftazidime hydrate	chemical concentration= 0.075 ug/ml normalized fitness= -6.54
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References

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