OMP ST:71181 ! Escherichia coli K-12 GSO189

Strain Summary

Strain Name	Escherichia coli K-12 GSO189
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	F- Lambda- rph-1 sroH(del)::FRT-kan-FRT
Strain Reference	PMID:19734312
Strain availability
Ancestry	parent:OMP ST:159 ! Escherichia coli K-12 MG1655
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:36877		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27559 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Actinomycin D	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:27666 CID:457193) Actinomycin D	chemical concentration= 15 ug/ml normalized fitness= -3.83
OMP_AN:36878		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27590 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:6093162 + CHEBI:4170) Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170)	chemical concentration= 0.05 ug/ml (in 50 mg/ml G6P) normalized fitness= 3.46
OMP_AN:36879		OMP:0007250	increased resistance to a chemical	Relative to: OMP_AN:27593 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:(-)-Norepinephrine	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:18357) (-)-Norepinephrine	chemical concentration= 1000 uM normalized fitness= 4.44
OMP_AN:36880		OMP:0007250	increased resistance to a chemical	Relative to: OMP_AN:27574 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Paraquat dichloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:28786) Paraquat dichloride	chemical concentration= 0.2 uM normalized fitness= 3.65
OMP_AN:36881		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27567 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Theophylline anhydrous	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:28177) Theophylline anhydrous	chemical concentration= 10 ug/ml normalized fitness= -4.25
OMP_AN:36882		OMP:0007912	decreased resistance to a chelator	Relative to: OMP_AN:27508 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:EGTA	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:30740) EGTA	chemical concentration= 1 mM normalized fitness= -3.14
OMP_AN:36883		OMP:0007520	increased population growth in high osmolarity	Relative to: OMP_AN:27595 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:NaCl	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:26710) NaCl	chemical concentration= 450 mM normalized fitness= 3.89
OMP_AN:36884		OMP:0006041	increased resistance to quinolone	Relative to: OMP_AN:27542 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Norfloxacin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:100246) Norfloxacin	chemical concentration= 0.02 ug/ml normalized fitness= 5.22
OMP_AN:36885		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27504 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Novobiocin sodium salt	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:31924) Novobiocin sodium salt	chemical concentration= 4 ug/ml normalized fitness= 3.4
OMP_AN:36886		OMP:0006057	decreased resistance to aminoglycoside	Relative to: OMP_AN:27527 Genotype differences: +sroH(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Spectinomycin dihydrochloride pentahydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate	chemical concentration= 4 ug/ml normalized fitness= -3.67
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References

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