OMP ST:71171 ! Escherichia coli K-12 GSO179

Strain Summary

Strain Name	Escherichia coli K-12 GSO179
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	F- Lambda- rph-1 ryhA(del)::FRT-kan-FRT
Strain Reference	PMID:19734312
Strain availability
Ancestry	parent:OMP ST:159 ! Escherichia coli K-12 MG1655
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:36924		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27531 Genotype differences: +ryhA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Ampicillin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:28971) Ampicillin	chemical concentration= 4 ug/ml normalized fitness= -3.98
OMP_AN:36925		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27535 Genotype differences: +ryhA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cefsulodin sodium salt hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:31380) Cefsulodin sodium salt hydrate	chemical concentration= 18 ug/ml normalized fitness= -6.11
OMP_AN:36926		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27514 Genotype differences: +ryhA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Chlorpromazine hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3649) Chlorpromazine hydrochloride	chemical concentration= 6 uM normalized fitness= -5.74
OMP_AN:36927		OMP:0007075	decreased growth factor requirement	Relative to: OMP_AN:27602 Genotype differences: +ryhA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:M9 medium:D-(+) Glucosamine hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:91431) D-(+) Glucosamine hydrochloride	chemical concentration= 0.2% normalized fitness= -3.54
OMP_AN:36928		OMP:0007070	decreased organic carbon source utilization	Relative to: OMP_AN:27612 Genotype differences: +ryhA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:M9 medium:D-(+) Glucosamine hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:91431) D-(+) Glucosamine hydrochloride	chemical concentration= 0.2% normalized fitness= -3.54
OMP_AN:36929		OMP:0006061	decreased resistance to tetracycline	Relative to: OMP_AN:27522 Genotype differences: +ryhA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Doxycycline hyclate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:34730) Doxycycline hyclate	chemical concentration= 1 ug/ml normalized fitness= -3.94
OMP_AN:36930		OMP:0006061	decreased resistance to tetracycline	Relative to: OMP_AN:27524 Genotype differences: +ryhA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Tetracycline hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:35006) Tetracycline hydrochloride	chemical concentration= 1 ug/ml normalized fitness= -6.25
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References

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