OMP ST:71143 ! Escherichia coli K-12 GSO147

Strain Summary

Strain Name	Escherichia coli K-12 GSO147
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	F- Lambda- rph-1 dsrA(del)::FRT-kan-FRT
Strain Reference	PMID:19734312
Strain availability
Ancestry	parent:OMP ST:159 ! Escherichia coli K-12 MG1655
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:37018		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27557 Genotype differences: +dsrA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:A22	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:2830968) A22	chemical concentration= 5 ug/ml normalized fitness= -3.26
OMP_AN:37019		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27552 Genotype differences: +dsrA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Azidothymidine	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:10110) Azidothymidine	chemical concentration= 1 ng/ml normalized fitness= -4.43
OMP_AN:37020		OMP:0007376	increased resistance to an alkylating agent	Relative to: OMP_AN:27502 Genotype differences: +dsrA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:methyl methanesulfonate (MMS)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:25255) methyl methanesulfonate (MMS)	chemical concentration= 0.05% normalized fitness= 3.81
OMP_AN:37021		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27537 Genotype differences: +dsrA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Mecillinam	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:51208) Mecillinam	chemical concentration= 0.09 ug/ml normalized fitness= -3.2
OMP_AN:37022		OMP:0007886	decreased resistance to a metal	Relative to: OMP_AN:27580 Genotype differences: +dsrA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Nickel stress-Ni(II)Cl2 hexahydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate	chemical concentration= 0.1 mM (LB) normalized fitness= -3.85
OMP_AN:37023		OMP:0006045	increased resistance to beta-lactam compound	Relative to: OMP_AN:27596 Genotype differences: +dsrA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cefaclor	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3478) Cefaclor	chemical concentration= 1 ug/ml normalized fitness= 3.8
OMP_AN:37024		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27569 Genotype differences: +dsrA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:EtOH	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:16236) EtOH	chemical concentration= 6 % normalized fitness= -4.3
OMP_AN:37025		OMP:0006040	decreased resistance to quinolone	Relative to: OMP_AN:27542 Genotype differences: +dsrA(del) -DE(araD-araB)567 -DE(rhaD-rhaB)568 -hsdR514 -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Norfloxacin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:100246) Norfloxacin	chemical concentration= 0.02 ug/ml normalized fitness= -3.72
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References

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