Difference between revisions of "OMP ST:74667 ! Virtual reference strain for Nichols RJ (2011) Cell 144, 143-156."

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
 
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 
||
 
||
−
*Pangenome: Eschericha coli
+
*Pangenome: Escherichia coli
 
*Subspecies and/or strain: K-12
 
*Subspecies and/or strain: K-12
 
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
 
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
Line 53: Line 53:
  
 
==Notes==
 
==Notes==
−
OMP_ST:74667 was created to use as the reference (or control) strain for the high-throughput phenotype studies of Nichols et al. (2011. Cell. 144:143-156).  
+
OMP_ST:74667 was created to use as the reference (or control) strain for the high-throughput phenotype studies of Nichols RJ et al. (2011) Cell 144:143-156. In this study, fitness in the various growth conditions was determined based on the sizes of spot colonies.  Colony sizes were normalized in two steps. First, colony sizes on each individual plate were normalized to correct for systematic differences. Second, the colony sizes for each strain were normalized based on the median colony size of that strain in all 324 conditions.
  
 +
Of the 4,602 strains that were screened, 4,502 strains were derivatives of E. coli K-12 BW25113; the remaining 100 strains were derivative of E. coli K-12 MG1655. For this reason, we have used the genotype of BW25113 as the genotype for the virtual reference strain.
  
−
Of the 4,602 strains that were screened, 4,502 strains were derivatives of E. coli K-12 BW25113; the remaining 100 strains were derivative of E. coli K-12 MG1655. For this reason, we have used the genotype of BW25113 as the genotype for the collection.
+
The collection of mutants that was screened included 4334 deletions of non-essential genes (the Keio Collection ([1]), 148 SPA-tagged derivatives of essential genes ([2] [3]), 9 point-mutant alleles of essential genes (as well as the corresponding control strains that carried the same antibioticR marker linked to the wild-type allele), 2 truncations of essential genes, and 100 deletions of small RNAs and small proteins (<ref name='PMID:19734312'/>). See the original paper for additional details about the strains used in the screen.
−
 
 
−
The collection of mutants that was screened included 4334 deletions of non-essential genes (the Keio Collection ([1]), 148 SPA-tagged derivatives of essential genes ([2] [3]), 9 point-mutant alleles of essential genes (as well as the corresponding control strains that carried the same antibioticR marker linked to the wild-type allele), 2 truncations of essential genes, and 100 deletions of small RNAs and small proteins (,ref name='PMID:19734312'/>). See the original paper for additional details about the strains used in the screen.
 
  
 
==Phenotype Annotation==
 
==Phenotype Annotation==
Line 65: Line 64:
 
******************************************************************************************
 
******************************************************************************************
 
*  
 
*  
−
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
+
** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
 
*  
 
*  
 
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Line 73: Line 72:
 
|-  
 
|-  
 
|
 
|
−
OMP_AN:27248
+
OMP_AN:27500
 +
|
 +
 
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Trimethoprim
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:45924) Trimethoprim
 +
|
 +
0.1, 0.2, 0.3, 0.4 ug/ml
 +
|-
 +
|
 +
OMP_AN:27501
 +
|
 +
 
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Dibucaine
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:247956) Dibucaine
 +
|
 +
0.4, 0.8, 1.2 mM
 +
|-
 +
|
 +
OMP_AN:27502
 +
|
 +
 
 +
|
 +
OMP:0007373
 +
|
 +
resistant to alkylating agent
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:methyl methanesulfonate (MMS)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:25255) methyl methanesulfonate (MMS)
 +
|
 +
0.05%
 +
|-
 +
|
 +
OMP_AN:27503
 +
|
 +
 
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Nitrofurantoin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:71415) Nitrofurantoin
 +
|
 +
0.1, 0.5, 1, 1.5, 2 ug/ml
 +
|-
 +
|
 +
OMP_AN:27504
 +
|
 +
 
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Novobiocin sodium salt
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:31924) Novobiocin sodium salt
 +
|
 +
4, 6, 8, 10, 12, 30 ug/ml
 +
|-
 +
|
 +
OMP_AN:27505
 +
|
 +
 
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Methotrexate hydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:165528) Methotrexate hydrate
 +
|
 +
1, 25 ug/ml
 +
|-
 +
|
 +
OMP_AN:27506
 +
|
 +
 
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Doxorubicin hydrochloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:31522) Doxorubicin hydrochloride
 +
|
 +
1, 10 ug/ml
 +
|-
 +
|
 +
OMP_AN:27507
 +
|
 +
 
 +
|
 +
OMP:0007909
 +
|
 +
resistant to a chelator
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:EDTA disodium salt dihydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:64758) EDTA disodium salt dihydrate
 +
|
 +
0.1,  0.5,  1 mM
 +
|-
 +
|
 +
OMP_AN:27508
 +
|
 +
 
 +
|
 +
OMP:0007909
 +
|
 +
resistant to a chelator
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:EGTA
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:30740) EGTA
 +
|
 +
0.1,  0.5,  1,  2 mM
 +
|-
 +
|
 +
OMP_AN:27509
 +
|
 +
 
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Cisplatin-cis-Diamineplatinum(II) dichloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:27899) Cisplatin-cis-Diamineplatinum(II) dichloride
 +
|
 +
20, 50, 100 ug/ml
 +
|-
 +
|
 +
OMP_AN:27510
 +
|
 +
 
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Mitomycin C
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:27504) Mitomycin C
 +
|
 +
0.1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27511
 +
|
 +
 
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:(-)-Epinephrine
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:28918) (-)-Epinephrine
 +
|
 +
50, 250, 1000 uM
 +
|-
 +
|
 +
OMP_AN:27512
 
|
 
|
  
Line 88: Line 459:
 
Nothing to compare<br/>
 
Nothing to compare<br/>
 
|
 
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Hydroxyurea
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:44423) Hydroxyurea
 +
|
 +
1, 5, 10 mM
 +
|-
 +
|
 +
OMP_AN:27513
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Phenazine methosulfate (PMS)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:8055) Phenazine methosulfate (PMS)
 +
|
 +
0.02, 0.05, 0.1 mM
 +
|-
 +
|
 +
OMP_AN:27514
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Chlorpromazine hydrochloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:3649) Chlorpromazine hydrochloride
 +
|
 +
3, 6, 12, 24 uM
 +
|-
 +
|
 +
OMP_AN:27515
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Fusidic acid sodium salt
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:126963539) Fusidic acid sodium salt
 +
|
 +
1, 5, 20, 50 ug/ml
 +
|-
 +
|
 +
OMP_AN:27516
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Thiolactomycin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:445629) Thiolactomycin
 +
|
 +
1, 5, 50 uM
 +
|-
 +
|
 +
OMP_AN:27517
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Nigericin sodium salt
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:16760591) Nigericin sodium salt
 +
|
 +
0.1, 1, 5 uM
 +
|-
 +
|
 +
OMP_AN:27518
 +
|
 +
 +
|
 +
OMP:0006039
 +
|
 +
resistant to macrolide
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Azithromycin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:2955) Azithromycin
 +
|
 +
0.02, 0.1, 1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27519
 +
|
 +
 +
|
 +
OMP:0006039
 +
|
 +
resistant to macrolide
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Clarithromycin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:3732) Clarithromycin
 +
|
 +
0.1, 1, 5, 10 ug/ml
 +
|-
 +
|
 +
OMP_AN:27520
 +
|
 +
 +
|
 +
OMP:0006039
 +
|
 +
resistant to macrolide
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Erythromycin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:42355) Erythromycin
 +
|
 +
0.1, 1, 5, 10 ug/ml
 +
|-
 +
|
 +
OMP_AN:27521
 +
|
 +
 +
|
 +
OMP:0006039
 +
|
 +
resistant to macrolide
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Spiramycin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:6419898) Spiramycin
 +
|
 +
1, 5, 20 ug/ml
 +
|-
 +
|
 +
OMP_AN:27522
 +
|
 +
 +
|
 +
OMP:0006065
 +
|
 +
resistant to tetracycline
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Doxycycline hyclate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:34730) Doxycycline hyclate
 +
|
 +
0.25, 0.5, 0.75, 1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27523
 +
|
 +
 +
|
 +
OMP:0006065
 +
|
 +
resistant to tetracycline
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Minocycline hydrochloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:50697) Minocycline hydrochloride
 +
|
 +
0.2, 0.5, 1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27524
 +
|
 +
 +
|
 +
OMP:0006065
 +
|
 +
resistant to tetracycline
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Tetracycline hydrochloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:35006) Tetracycline hydrochloride
 +
|
 +
0.25, 0.5, 0.75, 1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27525
 +
|
 +
 +
|
 +
OMP:0006060
 +
|
 +
resistant to aminoglycoside
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Amikacin sulfate salt (disulfate)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:2638) Amikacin sulfate salt (disulfate)
 +
|
 +
0.05, 0.1, 0.2 ug/ml
 +
|-
 +
|
 +
OMP_AN:27526
 +
|
 +
 +
|
 +
OMP:0006060
 +
|
 +
resistant to aminoglycoside
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Gentamicin sulfate salt
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:5312) Gentamicin sulfate salt
 +
|
 +
0.05, 0.1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27527
 +
|
 +
 +
|
 +
OMP:0006060
 +
|
 +
resistant to aminoglycoside
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Spectinomycin dihydrochloride pentahydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate
 +
|
 +
4, 6 ug/ml
 +
|-
 +
|
 +
OMP_AN:27528
 +
|
 +
 +
|
 +
OMP:0006060
 +
|
 +
resistant to aminoglycoside
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Streptomycin sulfate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:32158) Streptomycin sulfate
 +
|
 +
0.05 ug/ml
 +
|-
 +
|
 +
OMP_AN:27529
 +
|
 +
 +
|
 +
OMP:0006060
 +
|
 +
resistant to aminoglycoside
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Tobramycin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:28864) Tobramycin
 +
|
 +
0.05, 0.1, 0.2, 0.4 ug/ml
 +
|-
 +
|
 +
OMP_AN:27530
 +
|
 +
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Amoxicillin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:2676) Amoxicillin
 +
|
 +
0.25, 0.5, 1, 1.5 ug/ml
 +
|-
 +
|
 +
OMP_AN:27531
 +
|
 +
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Ampicillin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:28971) Ampicillin
 +
|
 +
1, 2, 4, 8 ug/ml
 +
|-
 +
|
 +
OMP_AN:27532
 +
|
 +
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Aztreonam
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:161680) Aztreonam
 +
|
 +
0.02, 0.04 ug/ml
 +
|-
 +
|
 +
OMP_AN:27533
 +
|
 +
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Carbenicillin disodium
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:34609) Carbenicillin disodium
 +
|
 +
0.5, 1, 1.5 ug/ml
 +
|-
 +
|
 +
OMP_AN:27534
 +
|
 +
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Cefoxitin sodium hydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:3501) Cefoxitin sodium hydrate
 +
|
 +
0.25, 0.5, 0.75, 1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27535
 +
|
 +
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Cefsulodin sodium salt hydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:31380) Cefsulodin sodium salt hydrate
 +
|
 +
6, 12, 18, 24 ug/ml
 +
|-
 +
|
 +
OMP_AN:27536
 +
|
 +
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Ceftazidime hydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:3509) Ceftazidime hydrate
 +
|
 +
0.025, 0.05, 0.075 ug/ml
 +
|-
 +
|
 +
OMP_AN:27537
 +
|
 +
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Mecillinam
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:51208) Mecillinam
 +
|
 +
0.03, 0.06, 0.09, 0.12 ug/ml
 +
|-
 +
|
 +
OMP_AN:27538
 +
|
 +
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Oxacillin sodium salt
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:52134) Oxacillin sodium salt
 +
|
 +
0.5, 5, 40 ug/ml
 +
|-
 +
|
 +
OMP_AN:27539
 +
|
 +
 +
|
 +
OMP:0006043
 +
|
 +
resistant to quinolone
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Ciprofloxacin hydrochloride hydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate
 +
|
 +
0.004, 0.006, 0.008 ug/ml
 +
|-
 +
|
 +
OMP_AN:27540
 +
|
 +
 +
|
 +
OMP:0006043
 +
|
 +
resistant to quinolone
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Levofloxacin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:63598) Levofloxacin
 +
|
 +
0.002 ug/ml
 +
|-
 +
|
 +
OMP_AN:27541
 +
|
 +
 +
|
 +
OMP:0006043
 +
|
 +
resistant to quinolone
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Nalidixic acid sodium salt
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:3864541) Nalidixic acid sodium salt
 +
|
 +
0.5, 1, 1.5, 2 ug/ml
 +
|-
 +
|
 +
OMP_AN:27542
 +
|
 +
 +
|
 +
OMP:0006043
 +
|
 +
resistant to quinolone
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Norfloxacin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:100246) Norfloxacin
 +
|
 +
0.01, 0.02, 0.04 ug/ml
 +
|-
 +
|
 +
OMP_AN:27543
 +
|
 +
 +
|
 +
OMP:0006043
 +
|
 +
resistant to quinolone
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Streptonigrin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:9287) Streptonigrin
 +
|
 +
0.1, 0.2, 0.5 ug/ml
 +
|-
 +
|
 +
OMP_AN:27544
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Chloramphenicol
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:17698) Chloramphenicol
 +
|
 +
0.5, 1, 1.5, 2 ug/ml
 +
|-
 +
|
 +
OMP_AN:27545
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Isoniazid
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:6030) Isoniazid
 +
|
 +
0.2, 1, 1.5 mM
 +
|-
 +
|
 +
OMP_AN:27546
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Pyocyanin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:8653) Pyocyanin
 +
|
 +
0.2, 1, 10 ug/ml
 +
|-
 +
|
 +
OMP_AN:27547
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Hydrogen peroxide
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:16240) Hydrogen peroxide
 +
|
 +
0.1, 0.5, 1, 2 mM
 +
|-
 +
|
 +
OMP_AN:27548
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Cerulenin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:171741) Cerulenin
 +
|
 +
1, 2, 4, 6 ug/ml
 +
|-
 +
|
 +
OMP_AN:27549
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:CHIR-090
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:134107 CID:11546620) CHIR-090
 +
|
 +
0.02, 0.025, 0.04, 0.05, 0.075 ug/ml
 +
|-
 +
|
 +
OMP_AN:27550
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Ethidium Bromide
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:4883) Ethidium Bromide
 +
|
 +
2, 10, 50 ug/ml
 +
|-
 +
|
 +
OMP_AN:27551
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Rifampicin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:28077) Rifampicin
 +
|
 +
1, 2 ug/ml
 +
|-
 +
|
 +
OMP_AN:27552
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Azidothymidine
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:10110) Azidothymidine
 +
|
 +
0.5, 1, 2.5 ng/ml
 +
|-
 +
|
 +
OMP_AN:27553
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Puromycin dihydrochloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:8642) Puromycin dihydrochloride
 +
|
 +
1, 5, 25 ug/ml
 +
|-
 +
|
 +
OMP_AN:27554
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Tunicamycin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:29699) Tunicamycin
 +
|
 +
1, 3, 7.5 ug/ml
 +
|-
 +
|
 +
OMP_AN:27555
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Fosfomycin disodium salt
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:6093162) Fosfomycin disodium salt
 +
|
 +
1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27556
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Bicyclomycin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:60584) Bicyclomycin
 +
|
 +
1, 10 ug/ml
 +
|-
 +
|
 +
OMP_AN:27557
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:A22
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:2830968) A22
 +
|
 +
0.5, 2, 5, 15 ug/ml
 +
|-
 +
|
 +
OMP_AN:27558
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:D-Cycloserine
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:40009) D-Cycloserine
 +
|
 +
16 ug/ml
 +
|-
 +
|
 +
OMP_AN:27559
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Actinomycin D
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:27666 CID:457193) Actinomycin D
 +
|
 +
2.5, 5, 10, 15 ug/ml
 +
|-
 +
|
 +
OMP_AN:27560
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Bacitracin Zinc Sulfate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:16219032) Bacitracin Zinc Sulfate
 +
|
 +
100, 200, 300 ug/ml
 +
|-
 +
|
 +
OMP_AN:27561
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Bleomycin sulfate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:34582) Bleomycin sulfate
 +
|
 +
0.1, 0.5, 1, 2 ug/ml
 +
|-
 +
|
 +
OMP_AN:27562
 +
|
 +
 +
|
 +
OMP:0007171
 +
|
 +
resistant to antimicrobial peptide
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Cecropin B
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:16130488) Cecropin B
 +
|
 +
0.1, 0.3 ug/ml
 +
|-
 +
|
 +
OMP_AN:27563
 +
|
 +
 +
|
 +
OMP:0007171
 +
|
 +
resistant to antimicrobial peptide
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Indolicidin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (UniProtKB:P33046) Indolicidin
 +
|
 +
0.1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27564
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Phleomycin
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:75044) Phleomycin
 +
|
 +
0.2, 0.5, 1 ug/ml
 +
|-
 +
|
 +
OMP_AN:27565
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Polymyxin B sulfate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:8310) Polymyxin B sulfate
 +
|
 +
1, 2, 4, 6 ug/ml
 +
|-
 +
|
 +
OMP_AN:27566
 +
|
 +
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Vancomycin HCl hydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:9932) Vancomycin HCl hydrate
 +
|
 +
10, 20, 50 ug/ml
 +
|-
 +
|
 +
OMP_AN:27567
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Theophylline anhydrous
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:28177) Theophylline anhydrous
 +
|
 +
10, 100 ug/ml
 +
|-
 +
|
 +
OMP_AN:27568
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:(±)-Verapamil hydrochloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:53188) (±)-Verapamil hydrochloride
 +
|
 +
0.1, 0.5, 1 mM
 +
|-
 +
|
 +
OMP_AN:27569
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:EtOH
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:16236) EtOH
 +
|
 +
2, 4, 6 %
 +
|-
 +
|
 +
OMP_AN:27570
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Propidium iodide
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:51240) Propidium iodide
 +
|
 +
1, 20, 50 ug/ml
 +
|-
 +
|
 +
OMP_AN:27571
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:CCCP (Carbonyl cyanide 3-chlorophenylhydrazone)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:3259) CCCP (Carbonyl cyanide 3-chlorophenylhydrazone)
 +
|
 +
0.1, 0.5, 2 ug/ml
 +
|-
 +
|
 +
OMP_AN:27572
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Epigallocatechin gallate (EGCG)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:4806) Epigallocatechin gallate (EGCG)
 +
|
 +
5, 20, 50 uM
 +
|-
 +
|
 +
OMP_AN:27573
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Procaine hydrochloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:8431) Procaine hydrochloride
 +
|
 +
1, 5, 10, 30 mM
 +
|-
 +
|
 +
OMP_AN:27574
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Paraquat dichloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:28786) Paraquat dichloride
 +
|
 +
0.2, 1, 5, 10, 18 uM
 +
|-
 +
|
 +
OMP_AN:27575
 +
|
 +
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Acriflavine (acriflavinium chloride)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:74728) Acriflavine (acriflavinium chloride)
 +
|
 +
2, 10 ug/ml
 +
|-
 +
|
 +
OMP_AN:27576
 +
|
 +
 +
|
 +
OMP:0007829
 +
|
 +
resistant to sulfonamide
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Sulfamethizole
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:9331) Sulfamethizole
 +
|
 +
100, 200, 300 ug/ml
 +
|-
 +
|
 +
OMP_AN:27577
 +
|
 +
 +
|
 +
OMP:0007829
 +
|
 +
resistant to sulfonamide
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Sulfamonomethoxine
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:32164) Sulfamonomethoxine
 +
|
 +
50, 100 ug/ml
 +
|-
 +
|
 +
OMP_AN:27578
 +
|
 +
 +
|
 +
OMP:0007884
 +
|
 +
resistant to a metal
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Cobalt stress-Co(II)Cl2 hexahydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:53503) Cobalt stress-Co(II)Cl2 hexahydrate
 +
|
 +
0.1, 0.5 mM (LB)
 +
|-
 +
|
 +
OMP_AN:27579
 +
|
 +
 +
|
 +
OMP:0007884
 +
|
 +
resistant to a metal
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Copper stress-CuCl2 dihydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:86318) Copper stress-CuCl2 dihydrate
 +
|
 +
1, 2, 4 mM (LB)
 +
|-
 +
|
 +
OMP_AN:27580
 +
|
 +
 +
|
 +
OMP:0007884
 +
|
 +
resistant to a metal
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Nickel stress-Ni(II)Cl2 hexahydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate
 +
|
 +
0.1, 1 mM (LB)
 +
|-
 +
|
 +
OMP_AN:27581
 +
|
 +
 +
|
 +
OMP:0007892
 +
|
 +
resistant to a surfactant
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Benzalkonium chloride
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:3020) Benzalkonium chloride
 +
|
 +
1, 10, 25 ug/ml
 +
|-
 +
|
 +
OMP_AN:27582
 +
|
 +
 +
|
 +
OMP:0007892
 +
|
 +
resistant to a surfactant
 +
|
 +
Relative to:
 +
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
*temperature:37C
 
*temperature:37C
 
*medium:LB agar
 
*medium:LB agar
Line 98: Line 2,640:
 
PMID:21185072
 
PMID:21185072
 
|
 
|
−
towards(CHEBI:8984)
+
towards some (CHEBI:8984) SDS
−
SDS
+
|
 +
0.5, 1, 2, 3, 4 %
 +
|-
 +
|
 +
OMP_AN:27583
 +
|
 +
 
 +
|
 +
OMP:0007892
 +
|
 +
resistant to a surfactant
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Triton X-100
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:9750) Triton X-100
 +
|
 +
0.01, 0.03, 0.2 %
 +
|-
 +
|
 +
OMP_AN:27584
 +
|
 +
 
 +
|
 +
OMP:0007899
 +
|
 +
resistant to bile acids
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Taurocholic acid sodium salt hydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:23687511) Taurocholic acid sodium salt hydrate
 +
|
 +
0.1, 0.5, 1 %
 +
|-
 +
|
 +
OMP_AN:27585
 +
|
 +
 
 +
|
 +
OMP:0007899
 +
|
 +
resistant to bile acids
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Cholate sodium hydrate
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:23679061) Cholate sodium hydrate
 +
|
 +
0.1, 0.5, 1, 2 %
 +
|-
 +
|
 +
OMP_AN:27586
 +
|
 +
 
 +
|
 +
OMP:0007899
 +
|
 +
resistant to bile acids
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Deoxycholate sodium
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:9177) Deoxycholate sodium
 +
|
 +
0.1, 0.5, 2 %
 +
|-
 +
|
 +
OMP_AN:27587
 +
|
 +
 
 +
|
 +
OMP:0007899
 +
|
 +
resistant to bile acids
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Bile salts chemical-Mixture of sodium cholate (CHEBI:26711) and sodium deoxycholate (CHEBI:9177)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:26711 + CHEBI:9177) Bile salts chemical-Mixture of sodium cholate (CHEBI:26711) and sodium deoxycholate (CHEBI:9177)
 +
|
 +
0.1, 0.5, 1, 2 %
 +
|-
 +
|
 +
OMP_AN:27588
 +
|
 +
 
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Triclosan/Irgasan
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:164200) Triclosan/Irgasan
 +
|
 +
0.05 ug/ml
 +
|-
 +
|
 +
OMP_AN:27589
 +
|
 +
 
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Cefsulodin + Mecillinam
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:31380 + CHEBI:51208) Cefsulodin + Mecillinam
 +
|
 +
6 + 0.03 ug/ml
 +
|-
 +
|
 +
OMP_AN:27590
 +
|
 +
 
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:6093162 + CHEBI:4170) Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170)
 +
|
 +
0.05, 0.2 ug/ml (in 50 mg/ml G6P)
 +
|-
 +
|
 +
OMP_AN:27591
 +
|
 +
 
 +
|
 +
OMP:0007876
 +
|
 +
resistant to an antimicrobial agent
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Trimethoprim (CHEBI:45924)  + Sulfamethizole (CHEBI:9331)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:45924 + CHEBI:9331) Trimethoprim (CHEBI:45924)  + Sulfamethizole (CHEBI:9331)
 +
|
 +
0.1 + 50 ug/ml
 +
|-
 +
|
 +
OMP_AN:27592
 +
|
 +
 
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Calcofluor White M2R (F3543 Fluorescent Brightener 28)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:50010) Calcofluor White M2R (F3543 Fluorescent Brightener 28)
 +
|
 +
50 ug/ml
 +
|-
 +
|
 +
OMP_AN:27593
 +
|
 +
 
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:(-)-Norepinephrine
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:18357) (-)-Norepinephrine
 +
|
 +
100, 1000 uM
 +
|-
 +
|
 +
OMP_AN:27594
 +
|
 +
 
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:SDS (CHEBI:8984) +EDTA (CHEBI:64758)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:64758 + CHEBI:8984) SDS (CHEBI:8984) +EDTA (CHEBI:64758)
 +
|
 +
0.5%/0.1mM, 0.5%/0.5mM, 1%/0.5mM
 +
|-
 +
|
 +
OMP_AN:27595
 +
|
 +
 
 +
|
 +
OMP:0007517
 +
|
 +
presence of population growth in high osmolarity
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:NaCl
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:26710) NaCl
 +
|
 +
150, 300, 450, 600 mM
 +
|-
 +
|
 +
OMP_AN:27596
 +
|
 +
 
 +
|
 +
OMP:0006047
 +
|
 +
resistant to beta-lactam
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Cefaclor
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:3478) Cefaclor
 +
|
 +
1, 2, 3 ug/ml
 +
|-
 +
|
 +
OMP_AN:27597
 +
|
 +
 
 +
|
 +
OMP:0007247
 +
|
 +
resistant to a chemical
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Radicicol
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:556075) Radicicol
 +
|
 +
1, 5, 10 uM
 +
|-
 +
|
 +
OMP_AN:27598
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:MOPS
 +
*medium:Iron excess-FeSO4 heptahydride (MOPS)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride (MOPS)
 +
|
 +
1mM (MOPS; normal 100uM)
 +
|-
 +
|
 +
OMP_AN:27599
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:MOPS
 +
*medium:Iron starvation-FeSO4·7H2O (MOPS)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O (MOPS)
 +
|
 +
2uM (MOPS; normal 100uM)
 +
|-
 +
|
 +
OMP_AN:27600
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:MOPS
 +
*medium:NH4Cl (MOPS)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:31206) NH4Cl (MOPS)
 +
|
 +
9.5mm
 +
|-
 +
|
 +
OMP_AN:27601
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:Sodium Acetate anhydrous (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:32954) Sodium Acetate anhydrous (M9)
 +
|
 +
0.6%
 +
|-
 +
|
 +
OMP_AN:27602
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:D-(+) Glucosamine hydrochloride (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:91431) D-(+) Glucosamine hydrochloride (M9)
 +
|
 +
0.2%
 +
|-
 +
|
 +
OMP_AN:27603
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:D-Glucose anhydrous (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:42758) D-Glucose anhydrous (M9)
 +
|
 +
0.2%
 +
|-
 +
|
 +
OMP_AN:27604
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:Glycerol (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:17754) Glycerol (M9)
 +
|
 +
0.4%
 +
|-
 +
|
 +
OMP_AN:27605
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:D-(+) Maltose monohydrate (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:23615261) D-(+) Maltose monohydrate (M9)
 +
|
 +
0.1%
 +
|-
 +
|
 +
OMP_AN:27606
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:N-Acetyl-D-glucosamine (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:506227) N-Acetyl-D-glucosamine (M9)
 +
|
 +
0.15%
 +
|-
 +
|
 +
OMP_AN:27607
 +
|
 +
 
 +
|
 +
OMP:0007018
 +
|
 +
does not require growth factor(s)
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:Succinic acid (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:15741) Succinic acid (M9)
 +
|
 +
0.3%
 +
|-
 +
|
 +
OMP_AN:27608
 +
|
 +
 
 +
|
 +
OMP:0007884
 +
|
 +
resistant to a metal
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:MOPS
 +
*medium:Iron excess-FeSO4 heptahydride (MOPS)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride (MOPS)
 +
|
 +
1mM (MOPS; normal 100uM)
 +
|-
 +
|
 +
OMP_AN:27609
 +
|
 +
 
 +
|
 +
OMP:0007962
 +
|
 +
presence of cell population growth during nutrient limitation
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:MOPS
 +
*medium:Iron starvation-FeSO4·7H2O (MOPS)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O (MOPS)
 +
|
 +
2uM (MOPS; normal 100uM)
 +
|-
 +
|
 +
OMP_AN:27610
 +
|
 +
 
 +
|
 +
OMP:0007306
 +
|
 +
presence of inorganic nitrogen source utilization
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:MOPS
 +
*medium:NH4Cl (MOPS)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:31206) NH4Cl (MOPS)
 +
|
 +
9.5mm
 +
|-
 +
|
 +
OMP_AN:27611
 +
|
 +
 
 +
|
 +
OMP:0006024
 +
|
 +
presence of organic carbon source utilization
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:Sodium Acetate anhydrous (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:32954) Sodium Acetate anhydrous (M9)
 +
|
 +
0.6%
 +
|-
 +
|
 +
OMP_AN:27612
 +
|
 +
 
 +
|
 +
OMP:0006024
 +
|
 +
presence of organic carbon source utilization
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:D-(+) Glucosamine hydrochloride (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:91431) D-(+) Glucosamine hydrochloride (M9)
 +
|
 +
0.2%
 +
|-
 +
|
 +
OMP_AN:27613
 +
|
 +
 
 +
|
 +
OMP:0006024
 +
|
 +
presence of organic carbon source utilization
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:D-Glucose anhydrous (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:42758) D-Glucose anhydrous (M9)
 +
|
 +
0.2%
 +
|-
 +
|
 +
OMP_AN:27614
 +
|
 +
 
 +
|
 +
OMP:0006024
 +
|
 +
presence of organic carbon source utilization
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:Glycerol (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:17754) Glycerol (M9)
 +
|
 +
0.4%
 +
|-
 +
|
 +
OMP_AN:27615
 +
|
 +
 
 +
|
 +
OMP:0006024
 +
|
 +
presence of organic carbon source utilization
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:D-(+) Maltose monohydrate (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CID:23615261) D-(+) Maltose monohydrate (M9)
 +
|
 +
0.1%
 +
|-
 +
|
 +
OMP_AN:27616
 +
|
 +
 
 +
|
 +
OMP:0006024
 +
|
 +
presence of organic carbon source utilization
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:N-Acetyl-D-glucosamine (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:506227) N-Acetyl-D-glucosamine (M9)
 +
|
 +
0.15%
 +
|-
 +
|
 +
OMP_AN:27617
 +
|
 +
 
 +
|
 +
OMP:0006024
 +
|
 +
presence of organic carbon source utilization
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:M9
 +
*medium:Succinic acid (M9)
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (CHEBI:15741) Succinic acid (M9)
 +
|
 +
0.3%
 +
|-
 +
|
 +
OMP_AN:27618
 +
|
 +
 
 +
|
 +
OMP:0005190
 +
|
 +
presence of anaerobic growth
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:Anaerobic
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:27619
 +
|
 +
 
 +
|
 +
OMP:0007282
 +
|
 +
presence of UV radiation resistance
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:UV
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
 
 +
|
 +
6, 12, 18, 24 sec
 +
|-
 +
|
 +
OMP_AN:27620
 +
|
 +
 
 +
|
 +
OMP:0007956
 +
|
 +
 
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:16C, 18C, or 20C
 +
*medium:LB agar
 +
*medium:Low temperature
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
 
 +
|
 +
OMP:0007956 is presence of population growth at low temperature
 +
 
 +
16C, 18C, or 20C
 +
|-
 +
|
 +
OMP_AN:27621
 +
|
 +
 
 +
|
 +
OMP:0007950
 +
|
 +
 
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
 
 +
*temperature:40C, 42C, 43.5C, or 45C
 +
*medium:LB agar
 +
*medium:High temperature
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
 
 +
|
 +
40, 42, 43.5, or 45 C
 +
 
 +
OMP:0007950 presence of population growth at high temperature
 +
|-
 +
|
 +
OMP_AN:27622
 +
|
 +
 
 +
|
 +
OMP:0007945
 +
|
 +
 
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
*
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:MES-HOMOPIPES
 +
*pH:pH 4, 4.5, 5.0, or 6.0
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (**SID:329817955 SID:57651422) MES-HOMOPIPES
 +
|
 +
pH 4, 4.5, 5.0, or 6.0
 +
 
 +
OMP:0007945 presence of population growth at acidic pH 
 +
|-
 +
|
 +
OMP_AN:27623
 +
|
 +
 
 +
|
 +
OMP:0007771
 +
|
 +
presence of population growth at alkaline pH
 +
|
 +
Relative to:
 +
 
 +
<hr>Genotype differences:<br>
 +
Nothing to compare<br/>
 +
<hr>Condition differences:<br>
 +
Nothing to compare<br/>
 +
|
 +
*
 +
*temperature:37C
 +
*medium:LB agar
 +
*medium:TAPS
 +
*pH:pH 8, 9, 9.5, or 10
 +
|
 +
ECO:0007005
 +
|
 +
high throughput direct assay evidence used in manual assertion
 +
|
 +
PMID:21185072
 +
|
 +
towards some (**SID:24900259) TAPS
 
|
 
|
−
concentrations of SDS used were (0.5, 1, 2, 3, or 4%)
+
pH 8, 9, 9.5, or 10
  
 
|- class="tableEdit_footer"  
 
|- class="tableEdit_footer"  

Latest revision as of 16:26, 5 July 2021

Strain Summary

Strain Name

Virtual reference strain for Nichols RJ (2011) Cell 144, 143-156.

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)::rrnB-3 rph-1

Strain Reference

PMID:21185072[1]

Strain availability
Ancestry
Annotated phenotypes


edit table


Notes

OMP_ST:74667 was created to use as the reference (or control) strain for the high-throughput phenotype studies of Nichols RJ et al. (2011) Cell 144:143-156. In this study, fitness in the various growth conditions was determined based on the sizes of spot colonies. Colony sizes were normalized in two steps. First, colony sizes on each individual plate were normalized to correct for systematic differences. Second, the colony sizes for each strain were normalized based on the median colony size of that strain in all 324 conditions.

Of the 4,602 strains that were screened, 4,502 strains were derivatives of E. coli K-12 BW25113; the remaining 100 strains were derivative of E. coli K-12 MG1655. For this reason, we have used the genotype of BW25113 as the genotype for the virtual reference strain.

The collection of mutants that was screened included 4334 deletions of non-essential genes (the Keio Collection ([1]), 148 SPA-tagged derivatives of essential genes ([2] [3]), 9 point-mutant alleles of essential genes (as well as the corresponding control strains that carried the same antibioticR marker linked to the wild-type allele), 2 truncations of essential genes, and 100 deletions of small RNAs and small proteins ([2]). See the original paper for additional details about the strains used in the screen.

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:27500

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Trimethoprim
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:45924) Trimethoprim

0.1, 0.2, 0.3, 0.4 ug/ml

OMP_AN:27501

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Dibucaine
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:247956) Dibucaine

0.4, 0.8, 1.2 mM

OMP_AN:27502

OMP:0007373

resistant to alkylating agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:methyl methanesulfonate (MMS)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:25255) methyl methanesulfonate (MMS)

0.05%

OMP_AN:27503

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Nitrofurantoin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:71415) Nitrofurantoin

0.1, 0.5, 1, 1.5, 2 ug/ml

OMP_AN:27504

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Novobiocin sodium salt
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31924) Novobiocin sodium salt

4, 6, 8, 10, 12, 30 ug/ml

OMP_AN:27505

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Methotrexate hydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:165528) Methotrexate hydrate

1, 25 ug/ml

OMP_AN:27506

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Doxorubicin hydrochloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31522) Doxorubicin hydrochloride

1, 10 ug/ml

OMP_AN:27507

OMP:0007909

resistant to a chelator

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:EDTA disodium salt dihydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:64758) EDTA disodium salt dihydrate

0.1, 0.5, 1 mM

OMP_AN:27508

OMP:0007909

resistant to a chelator

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:EGTA
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:30740) EGTA

0.1, 0.5, 1, 2 mM

OMP_AN:27509

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Cisplatin-cis-Diamineplatinum(II) dichloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:27899) Cisplatin-cis-Diamineplatinum(II) dichloride

20, 50, 100 ug/ml

OMP_AN:27510

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Mitomycin C
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:27504) Mitomycin C

0.1 ug/ml

OMP_AN:27511

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:(-)-Epinephrine
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28918) (-)-Epinephrine

50, 250, 1000 uM

OMP_AN:27512

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Hydroxyurea
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:44423) Hydroxyurea

1, 5, 10 mM

OMP_AN:27513

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Phenazine methosulfate (PMS)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8055) Phenazine methosulfate (PMS)

0.02, 0.05, 0.1 mM

OMP_AN:27514

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Chlorpromazine hydrochloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3649) Chlorpromazine hydrochloride

3, 6, 12, 24 uM

OMP_AN:27515

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Fusidic acid sodium salt
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:126963539) Fusidic acid sodium salt

1, 5, 20, 50 ug/ml

OMP_AN:27516

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Thiolactomycin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:445629) Thiolactomycin

1, 5, 50 uM

OMP_AN:27517

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Nigericin sodium salt
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:16760591) Nigericin sodium salt

0.1, 1, 5 uM

OMP_AN:27518

OMP:0006039

resistant to macrolide

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Azithromycin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:2955) Azithromycin

0.02, 0.1, 1 ug/ml

OMP_AN:27519

OMP:0006039

resistant to macrolide

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Clarithromycin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3732) Clarithromycin

0.1, 1, 5, 10 ug/ml

OMP_AN:27520

OMP:0006039

resistant to macrolide

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Erythromycin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:42355) Erythromycin

0.1, 1, 5, 10 ug/ml

OMP_AN:27521

OMP:0006039

resistant to macrolide

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Spiramycin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:6419898) Spiramycin

1, 5, 20 ug/ml

OMP_AN:27522

OMP:0006065

resistant to tetracycline

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Doxycycline hyclate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:34730) Doxycycline hyclate

0.25, 0.5, 0.75, 1 ug/ml

OMP_AN:27523

OMP:0006065

resistant to tetracycline

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Minocycline hydrochloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:50697) Minocycline hydrochloride

0.2, 0.5, 1 ug/ml

OMP_AN:27524

OMP:0006065

resistant to tetracycline

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Tetracycline hydrochloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:35006) Tetracycline hydrochloride

0.25, 0.5, 0.75, 1 ug/ml

OMP_AN:27525

OMP:0006060

resistant to aminoglycoside

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Amikacin sulfate salt (disulfate)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:2638) Amikacin sulfate salt (disulfate)

0.05, 0.1, 0.2 ug/ml

OMP_AN:27526

OMP:0006060

resistant to aminoglycoside

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Gentamicin sulfate salt
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:5312) Gentamicin sulfate salt

0.05, 0.1 ug/ml

OMP_AN:27527

OMP:0006060

resistant to aminoglycoside

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Spectinomycin dihydrochloride pentahydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate

4, 6 ug/ml

OMP_AN:27528

OMP:0006060

resistant to aminoglycoside

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Streptomycin sulfate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:32158) Streptomycin sulfate

0.05 ug/ml

OMP_AN:27529

OMP:0006060

resistant to aminoglycoside

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Tobramycin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28864) Tobramycin

0.05, 0.1, 0.2, 0.4 ug/ml

OMP_AN:27530

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Amoxicillin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:2676) Amoxicillin

0.25, 0.5, 1, 1.5 ug/ml

OMP_AN:27531

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Ampicillin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28971) Ampicillin

1, 2, 4, 8 ug/ml

OMP_AN:27532

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Aztreonam
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:161680) Aztreonam

0.02, 0.04 ug/ml

OMP_AN:27533

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Carbenicillin disodium
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:34609) Carbenicillin disodium

0.5, 1, 1.5 ug/ml

OMP_AN:27534

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Cefoxitin sodium hydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3501) Cefoxitin sodium hydrate

0.25, 0.5, 0.75, 1 ug/ml

OMP_AN:27535

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Cefsulodin sodium salt hydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31380) Cefsulodin sodium salt hydrate

6, 12, 18, 24 ug/ml

OMP_AN:27536

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Ceftazidime hydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3509) Ceftazidime hydrate

0.025, 0.05, 0.075 ug/ml

OMP_AN:27537

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Mecillinam
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:51208) Mecillinam

0.03, 0.06, 0.09, 0.12 ug/ml

OMP_AN:27538

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Oxacillin sodium salt
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:52134) Oxacillin sodium salt

0.5, 5, 40 ug/ml

OMP_AN:27539

OMP:0006043

resistant to quinolone

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Ciprofloxacin hydrochloride hydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate

0.004, 0.006, 0.008 ug/ml

OMP_AN:27540

OMP:0006043

resistant to quinolone

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Levofloxacin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:63598) Levofloxacin

0.002 ug/ml

OMP_AN:27541

OMP:0006043

resistant to quinolone

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Nalidixic acid sodium salt
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:3864541) Nalidixic acid sodium salt

0.5, 1, 1.5, 2 ug/ml

OMP_AN:27542

OMP:0006043

resistant to quinolone

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Norfloxacin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:100246) Norfloxacin

0.01, 0.02, 0.04 ug/ml

OMP_AN:27543

OMP:0006043

resistant to quinolone

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Streptonigrin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9287) Streptonigrin

0.1, 0.2, 0.5 ug/ml

OMP_AN:27544

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Chloramphenicol
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:17698) Chloramphenicol

0.5, 1, 1.5, 2 ug/ml

OMP_AN:27545

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Isoniazid
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:6030) Isoniazid

0.2, 1, 1.5 mM

OMP_AN:27546

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Pyocyanin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8653) Pyocyanin

0.2, 1, 10 ug/ml

OMP_AN:27547

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Hydrogen peroxide
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:16240) Hydrogen peroxide

0.1, 0.5, 1, 2 mM

OMP_AN:27548

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Cerulenin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:171741) Cerulenin

1, 2, 4, 6 ug/ml

OMP_AN:27549

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:CHIR-090
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:134107 CID:11546620) CHIR-090

0.02, 0.025, 0.04, 0.05, 0.075 ug/ml

OMP_AN:27550

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Ethidium Bromide
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:4883) Ethidium Bromide

2, 10, 50 ug/ml

OMP_AN:27551

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Rifampicin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28077) Rifampicin

1, 2 ug/ml

OMP_AN:27552

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Azidothymidine
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:10110) Azidothymidine

0.5, 1, 2.5 ng/ml

OMP_AN:27553

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Puromycin dihydrochloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8642) Puromycin dihydrochloride

1, 5, 25 ug/ml

OMP_AN:27554

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Tunicamycin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:29699) Tunicamycin

1, 3, 7.5 ug/ml

OMP_AN:27555

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Fosfomycin disodium salt
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:6093162) Fosfomycin disodium salt

1 ug/ml

OMP_AN:27556

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Bicyclomycin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:60584) Bicyclomycin

1, 10 ug/ml

OMP_AN:27557

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:A22
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:2830968) A22

0.5, 2, 5, 15 ug/ml

OMP_AN:27558

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:D-Cycloserine
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:40009) D-Cycloserine

16 ug/ml

OMP_AN:27559

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Actinomycin D
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:27666 CID:457193) Actinomycin D

2.5, 5, 10, 15 ug/ml

OMP_AN:27560

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Bacitracin Zinc Sulfate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:16219032) Bacitracin Zinc Sulfate

100, 200, 300 ug/ml

OMP_AN:27561

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Bleomycin sulfate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:34582) Bleomycin sulfate

0.1, 0.5, 1, 2 ug/ml

OMP_AN:27562

OMP:0007171

resistant to antimicrobial peptide

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Cecropin B
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:16130488) Cecropin B

0.1, 0.3 ug/ml

OMP_AN:27563

OMP:0007171

resistant to antimicrobial peptide

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Indolicidin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (UniProtKB:P33046) Indolicidin

0.1 ug/ml

OMP_AN:27564

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Phleomycin
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75044) Phleomycin

0.2, 0.5, 1 ug/ml

OMP_AN:27565

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Polymyxin B sulfate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8310) Polymyxin B sulfate

1, 2, 4, 6 ug/ml

OMP_AN:27566

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Vancomycin HCl hydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9932) Vancomycin HCl hydrate

10, 20, 50 ug/ml

OMP_AN:27567

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Theophylline anhydrous
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28177) Theophylline anhydrous

10, 100 ug/ml

OMP_AN:27568

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:(±)-Verapamil hydrochloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:53188) (±)-Verapamil hydrochloride

0.1, 0.5, 1 mM

OMP_AN:27569

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:EtOH
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:16236) EtOH

2, 4, 6 %

OMP_AN:27570

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Propidium iodide
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:51240) Propidium iodide

1, 20, 50 ug/ml

OMP_AN:27571

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:CCCP (Carbonyl cyanide 3-chlorophenylhydrazone)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3259) CCCP (Carbonyl cyanide 3-chlorophenylhydrazone)

0.1, 0.5, 2 ug/ml

OMP_AN:27572

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Epigallocatechin gallate (EGCG)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:4806) Epigallocatechin gallate (EGCG)

5, 20, 50 uM

OMP_AN:27573

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Procaine hydrochloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8431) Procaine hydrochloride

1, 5, 10, 30 mM

OMP_AN:27574

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Paraquat dichloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28786) Paraquat dichloride

0.2, 1, 5, 10, 18 uM

OMP_AN:27575

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Acriflavine (acriflavinium chloride)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:74728) Acriflavine (acriflavinium chloride)

2, 10 ug/ml

OMP_AN:27576

OMP:0007829

resistant to sulfonamide

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Sulfamethizole
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9331) Sulfamethizole

100, 200, 300 ug/ml

OMP_AN:27577

OMP:0007829

resistant to sulfonamide

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Sulfamonomethoxine
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:32164) Sulfamonomethoxine

50, 100 ug/ml

OMP_AN:27578

OMP:0007884

resistant to a metal

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Cobalt stress-Co(II)Cl2 hexahydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:53503) Cobalt stress-Co(II)Cl2 hexahydrate

0.1, 0.5 mM (LB)

OMP_AN:27579

OMP:0007884

resistant to a metal

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Copper stress-CuCl2 dihydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:86318) Copper stress-CuCl2 dihydrate

1, 2, 4 mM (LB)

OMP_AN:27580

OMP:0007884

resistant to a metal

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Nickel stress-Ni(II)Cl2 hexahydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate

0.1, 1 mM (LB)

OMP_AN:27581

OMP:0007892

resistant to a surfactant

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Benzalkonium chloride
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3020) Benzalkonium chloride

1, 10, 25 ug/ml

OMP_AN:27582

OMP:0007892

resistant to a surfactant

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:SDS
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8984) SDS

0.5, 1, 2, 3, 4 %

OMP_AN:27583

OMP:0007892

resistant to a surfactant

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Triton X-100
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9750) Triton X-100

0.01, 0.03, 0.2 %

OMP_AN:27584

OMP:0007899

resistant to bile acids

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Taurocholic acid sodium salt hydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:23687511) Taurocholic acid sodium salt hydrate

0.1, 0.5, 1 %

OMP_AN:27585

OMP:0007899

resistant to bile acids

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Cholate sodium hydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:23679061) Cholate sodium hydrate

0.1, 0.5, 1, 2 %

OMP_AN:27586

OMP:0007899

resistant to bile acids

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Deoxycholate sodium
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9177) Deoxycholate sodium

0.1, 0.5, 2 %

OMP_AN:27587

OMP:0007899

resistant to bile acids

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Bile salts chemical-Mixture of sodium cholate (CHEBI:26711) and sodium deoxycholate (CHEBI:9177)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:26711 + CHEBI:9177) Bile salts chemical-Mixture of sodium cholate (CHEBI:26711) and sodium deoxycholate (CHEBI:9177)

0.1, 0.5, 1, 2 %

OMP_AN:27588

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Triclosan/Irgasan
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:164200) Triclosan/Irgasan

0.05 ug/ml

OMP_AN:27589

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Cefsulodin + Mecillinam
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31380 + CHEBI:51208) Cefsulodin + Mecillinam

6 + 0.03 ug/ml

OMP_AN:27590

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:6093162 + CHEBI:4170) Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170)

0.05, 0.2 ug/ml (in 50 mg/ml G6P)

OMP_AN:27591

OMP:0007876

resistant to an antimicrobial agent

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare

 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:45924 + CHEBI:9331) Trimethoprim (CHEBI:45924) + Sulfamethizole (CHEBI:9331)

0.1 + 50 ug/ml

OMP_AN:27592

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Calcofluor White M2R (F3543 Fluorescent Brightener 28)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:50010) Calcofluor White M2R (F3543 Fluorescent Brightener 28)

50 ug/ml

OMP_AN:27593

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:(-)-Norepinephrine
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:18357) (-)-Norepinephrine

100, 1000 uM

OMP_AN:27594

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare

 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:64758 + CHEBI:8984) SDS (CHEBI:8984) +EDTA (CHEBI:64758)

0.5%/0.1mM, 0.5%/0.5mM, 1%/0.5mM

OMP_AN:27595

OMP:0007517

presence of population growth in high osmolarity

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:NaCl
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:26710) NaCl

150, 300, 450, 600 mM

OMP_AN:27596

OMP:0006047

resistant to beta-lactam

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Cefaclor
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3478) Cefaclor

1, 2, 3 ug/ml

OMP_AN:27597

OMP:0007247

resistant to a chemical

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Radicicol
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:556075) Radicicol

1, 5, 10 uM

OMP_AN:27598

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:MOPS
  • medium:Iron excess-FeSO4 heptahydride (MOPS)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride (MOPS)

1mM (MOPS; normal 100uM)

OMP_AN:27599

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:MOPS
  • medium:Iron starvation-FeSO4·7H2O (MOPS)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O (MOPS)

2uM (MOPS; normal 100uM)

OMP_AN:27600

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:MOPS
  • medium:NH4Cl (MOPS)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31206) NH4Cl (MOPS)

9.5mm

OMP_AN:27601

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:Sodium Acetate anhydrous (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:32954) Sodium Acetate anhydrous (M9)

0.6%

OMP_AN:27602

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:D-(+) Glucosamine hydrochloride (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:91431) D-(+) Glucosamine hydrochloride (M9)

0.2%

OMP_AN:27603

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:D-Glucose anhydrous (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:42758) D-Glucose anhydrous (M9)

0.2%

OMP_AN:27604

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:Glycerol (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:17754) Glycerol (M9)

0.4%

OMP_AN:27605

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:D-(+) Maltose monohydrate (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:23615261) D-(+) Maltose monohydrate (M9)

0.1%

OMP_AN:27606

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:N-Acetyl-D-glucosamine (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:506227) N-Acetyl-D-glucosamine (M9)

0.15%

OMP_AN:27607

OMP:0007018

does not require growth factor(s)

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:Succinic acid (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:15741) Succinic acid (M9)

0.3%

OMP_AN:27608

OMP:0007884

resistant to a metal

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:MOPS
  • medium:Iron excess-FeSO4 heptahydride (MOPS)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride (MOPS)

1mM (MOPS; normal 100uM)

OMP_AN:27609

OMP:0007962

presence of cell population growth during nutrient limitation

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:MOPS
  • medium:Iron starvation-FeSO4·7H2O (MOPS)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O (MOPS)

2uM (MOPS; normal 100uM)

OMP_AN:27610

OMP:0007306

presence of inorganic nitrogen source utilization

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:MOPS
  • medium:NH4Cl (MOPS)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31206) NH4Cl (MOPS)

9.5mm

OMP_AN:27611

OMP:0006024

presence of organic carbon source utilization

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:Sodium Acetate anhydrous (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:32954) Sodium Acetate anhydrous (M9)

0.6%

OMP_AN:27612

OMP:0006024

presence of organic carbon source utilization

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:D-(+) Glucosamine hydrochloride (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:91431) D-(+) Glucosamine hydrochloride (M9)

0.2%

OMP_AN:27613

OMP:0006024

presence of organic carbon source utilization

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:D-Glucose anhydrous (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:42758) D-Glucose anhydrous (M9)

0.2%

OMP_AN:27614

OMP:0006024

presence of organic carbon source utilization

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:Glycerol (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:17754) Glycerol (M9)

0.4%

OMP_AN:27615

OMP:0006024

presence of organic carbon source utilization

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:D-(+) Maltose monohydrate (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:23615261) D-(+) Maltose monohydrate (M9)

0.1%

OMP_AN:27616

OMP:0006024

presence of organic carbon source utilization

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:N-Acetyl-D-glucosamine (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:506227) N-Acetyl-D-glucosamine (M9)

0.15%

OMP_AN:27617

OMP:0006024

presence of organic carbon source utilization

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:M9
  • medium:Succinic acid (M9)
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:15741) Succinic acid (M9)

0.3%

OMP_AN:27618

OMP:0005190

presence of anaerobic growth

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:Anaerobic
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

OMP_AN:27619

OMP:0007282

presence of UV radiation resistance

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:UV
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

6, 12, 18, 24 sec

OMP_AN:27620

OMP:0007956

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:16C, 18C, or 20C
  • medium:LB agar
  • medium:Low temperature
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

OMP:0007956 is presence of population growth at low temperature

16C, 18C, or 20C

OMP_AN:27621

OMP:0007950

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:40C, 42C, 43.5C, or 45C
  • medium:LB agar
  • medium:High temperature
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

40, 42, 43.5, or 45 C

OMP:0007950 presence of population growth at high temperature

OMP_AN:27622

OMP:0007945

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:MES-HOMOPIPES
  • pH:pH 4, 4.5, 5.0, or 6.0
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (**SID:329817955 SID:57651422) MES-HOMOPIPES

pH 4, 4.5, 5.0, or 6.0

OMP:0007945 presence of population growth at acidic pH

OMP_AN:27623

OMP:0007771

presence of population growth at alkaline pH

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB agar
  • medium:TAPS
  • pH:pH 8, 9, 9.5, or 10
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (**SID:24900259) TAPS

pH 8, 9, 9.5, or 10

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References

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  1. ↑ 1.000 1.001 1.002 1.003 1.004 1.005 1.006 1.007 1.008 1.009 1.010 1.011 1.012 1.013 1.014 1.015 1.016 1.017 1.018 1.019 1.020 1.021 1.022 1.023 1.024 1.025 1.026 1.027 1.028 1.029 1.030 1.031 1.032 1.033 1.034 1.035 1.036 1.037 1.038 1.039 1.040 1.041 1.042 1.043 1.044 1.045 1.046 1.047 1.048 1.049 1.050 1.051 1.052 1.053 1.054 1.055 1.056 1.057 1.058 1.059 1.060 1.061 1.062 1.063 1.064 1.065 1.066 1.067 1.068 1.069 1.070 1.071 1.072 1.073 1.074 1.075 1.076 1.077 1.078 1.079 1.080 1.081 1.082 1.083 1.084 1.085 1.086 1.087 1.088 1.089 1.090 1.091 1.092 1.093 1.094 1.095 1.096 1.097 1.098 1.099 1.100 1.101 1.102 1.103 1.104 1.105 1.106 1.107 1.108 1.109 1.110 1.111 1.112 1.113 1.114 1.115 1.116 1.117 1.118 1.119 1.120 1.121 1.122 1.123 1.124 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
  2. ↑ Hobbs, EC et al. (2010) Small RNAs and small proteins involved in resistance to cell envelope stress and acid shock in Escherichia coli: analysis of a bar-coded mutant collection. J. Bacteriol. 192 59-67 PubMed OMPwiki page
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