Difference between revisions of "OMP ST:1120 ! Escherichia coli K-12 JW0659"
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*chemical concentration= 4 ug/ml | *chemical concentration= 4 ug/ml | ||
*normalized fitness= -3.36 | *normalized fitness= -3.36 | ||
| + | |- | ||
| + | | | ||
| + | OMP_AN:28959 | ||
| + | | | ||
| + | |||
| + | | | ||
| + | OMP:0007879 | ||
| + | | | ||
| + | decreased resistance to an antimicrobial agent | ||
| + | | | ||
| + | Relative to: OMP_AN:27552 | ||
| + | |||
| + | <hr>Genotype differences:<br> | ||
| + | +lacZ4787(del)( +ubiF722(del) -lacZ4787(del) | ||
| + | <hr>Condition differences:<br> | ||
| + | no differences | ||
| + | | | ||
| + | |||
| + | *temperature:37C | ||
| + | *medium:LB agar | ||
| + | *medium:Azidothymidine | ||
| + | | | ||
| + | ECO:0007005 | ||
| + | | | ||
| + | high throughput direct assay evidence used in manual assertion | ||
| + | | | ||
| + | PMID:21185072 | ||
| + | | | ||
| + | towards some (CHEBI:10110) Azidothymidine | ||
| + | | | ||
| + | |||
| + | *chemical concentration= 1 ng/ml | ||
| + | *normalized fitness= -3.2 | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 21:07, 22 October 2019
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW0659 |
|---|---|
| Synonyms |
JW0659-5 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 ubiF722(del)::kan |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:1036 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +ubiF722(del) -IN(rrnD-rrnE)1 Condition differences: no differences |
|
ECO:0005803 |
motility assay evidence |
||||
|
OMP_AN:28956 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27601 Genotype differences: +lacZ4787(del)( +ubiF722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:32954) Sodium Acetate anhydrous |
| ||
|
OMP_AN:28957 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27611 Genotype differences: +lacZ4787(del)( +ubiF722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:32954) Sodium Acetate anhydrous |
| ||
|
OMP_AN:28958 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27531 Genotype differences: +lacZ4787(del)( +ubiF722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28971) Ampicillin |
| ||
|
OMP_AN:28959 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27552 Genotype differences: +lacZ4787(del)( +ubiF722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:10110) Azidothymidine |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Inoue, T et al. (2007) Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. J. Bacteriol. 189 950-7 PubMed OMPwiki page
- ↑ 2.0 2.1 2.2 2.3 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
