OMP ST:74300 ! Escherichia coli K-12 JW5418
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW5418 |
|---|---|
| Synonyms |
JW5418-1 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 yfjO787(del)::FRT-kan-FRT |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:36110 |
OMP:0007960 |
decreased population growth at low temperature |
Relative to: OMP_AN:27620 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences:
|
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
|
OMP_AN:36111 |
OMP:0007954 |
decreased population growth at high temperature |
Relative to: OMP_AN:27621 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences:
|
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
|
OMP_AN:36112 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27550 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:4883) Ethidium Bromide |
| ||
|
OMP_AN:36113 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27590 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:6093162 + CHEBI:4170) Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170) |
| ||
|
OMP_AN:36114 |
OMP:0007376 |
increased resistance to an alkylating agent |
Relative to: OMP_AN:27502 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:25255) methyl methanesulfonate (MMS) |
| ||
|
OMP_AN:36115 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27600 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
|
OMP_AN:36116 |
OMP:0007033 |
increased utilization of inorganic nitrogen source |
Relative to: OMP_AN:27610 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
|
OMP_AN:36117 |
OMP:0006041 |
increased resistance to quinolone |
Relative to: OMP_AN:27539 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate |
| ||
|
OMP_AN:36118 |
OMP:0007009 |
increased population growth at acidic pH |
Relative to: OMP_AN:27622 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (**SID:329817955 SID:57651422) MES-HOMOPIPES |
| ||
|
OMP_AN:36119 |
OMP:0005098 |
decreased resistance to UV radiation |
Relative to: OMP_AN:27619 Genotype differences: +lacZ4787(del)( +yfjO787(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
o
- OMP:0005098 ! decreased resistance to UV radiation
- OMP:0006041 ! increased resistance to quinolone
- OMP:0007009 ! increased growth at acidic pH
- OMP:0007033 ! increased utilization of inorganic nitrogen source
- OMP:0007074 ! increased growth factor requirement
- OMP:0007376 ! increased resistance to alkylating agent
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
