OMP ST:73871 ! Escherichia coli K-12 JW4130
Contents
Strain Summary
Strain Name |
Escherichia coli K-12 JW4130 |
---|---|
Synonyms |
JW4130-1 |
Taxon Information |
|
Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 hfq-722(del)::FRT-kan-FRT |
Strain Reference | |
Strain availability | |
Ancestry | |
Annotated phenotypes |
|
Notes
Phenotype Annotation
Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
---|---|---|---|---|---|---|---|---|---|---|
OMP_AN:35159 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27575 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:74728) Acriflavine (acriflavinium chloride) |
| ||
OMP_AN:35160 |
OMP:0007173 |
decreased resistance to host defense peptides |
Relative to: OMP_AN:27562 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:16130488) Cecropin B |
| ||
OMP_AN:35161 |
OMP:0007903 |
decreased resistance to bile acids |
Relative to: OMP_AN:27585 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:23679061) Cholate sodium hydrate |
| ||
OMP_AN:35162 |
OMP:0007886 |
decreased resistance to a metal |
Relative to: OMP_AN:27579 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:86318) Copper stress-CuCl2 dihydrate |
| ||
OMP_AN:35163 |
OMP:0007903 |
decreased resistance to bile acids |
Relative to: OMP_AN:27586 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9177) Deoxycholate sodium |
| ||
OMP_AN:35164 |
OMP:0006036 |
decreased resistance to macrolide |
Relative to: OMP_AN:27520 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42355) Erythromycin |
| ||
OMP_AN:35165 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27602 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:91431) D-(+) Glucosamine hydrochloride |
| ||
OMP_AN:35166 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27612 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:91431) D-(+) Glucosamine hydrochloride |
| ||
OMP_AN:35167 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27513 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8055) Phenazine methosulfate (PMS) |
| ||
OMP_AN:35168 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27546 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8653) Pyocyanin |
| ||
OMP_AN:35169 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27544 Genotype differences: +lacZ4787(del)( +hfq-722(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:17698) Chloramphenicol |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
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- OMP:0006036 ! decreased resistance to macrolide
- OMP:0007070 ! decreased organic carbon source utilization
- OMP:0007075 ! decreased growth factor requirement
- OMP:0007173 ! decreased resistance to antimicrobial peptide
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007886 ! decreased resistance to a metal
- OMP:0007903 ! decreased resistance to bile acids