OMP ST:73503 ! Escherichia coli K-12 JW3525

Strain Summary

Strain Name	Escherichia coli K-12 JW3525
Synonyms	JW3525-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 cspA740(del)::FRT-kan-FRT
Strain Reference	PMID:16738554^[1] Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:33632	OMP:0006061	decreased resistance to tetracycline	Relative to: OMP_AN:27523 Genotype differences: +lacZ4787(del)( +cspA740(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Minocycline hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:50697) Minocycline hydrochloride	chemical concentration= 1 ug/ml normalized fitness= -3.2
OMP_AN:33633	OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27570 Genotype differences: +lacZ4787(del)( +cspA740(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Propidium iodide	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:51240) Propidium iodide	chemical concentration= 50 ug/ml normalized fitness= -3.51
OMP_AN:33634	OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27564 Genotype differences: +lacZ4787(del)( +cspA740(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Phleomycin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:75044) Phleomycin	chemical concentration= 1 ug/ml normalized fitness= -3.52
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↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
↑ ^2.0 ^2.1 ^2.2 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page