OMP ST:73317 ! Escherichia coli K-12 JW3198
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW3198 |
|---|---|
| Synonyms |
JW3198-1 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 sspA757(del)::FRT-kan-FRT |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:33189 |
OMP:0007954 |
decreased population growth at high temperature |
Relative to: OMP_AN:27621 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences:
|
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
|
OMP_AN:33190 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27559 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:27666 CID:457193) Actinomycin D |
| ||
|
OMP_AN:33191 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27601 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:32954) Sodium Acetate anhydrous |
| ||
|
OMP_AN:33192 |
OMP:0007071 |
increased organic carbon source utilization |
Relative to: OMP_AN:27611 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:32954) Sodium Acetate anhydrous |
| ||
|
OMP_AN:33193 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27561 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:34582) Bleomycin sulfate |
| ||
|
OMP_AN:33194 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27549 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:134107 CID:11546620) CHIR-090 |
| ||
|
OMP_AN:33195 |
OMP:0006045 |
increased resistance to beta-lactam compound |
Relative to: OMP_AN:27534 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3501) Cefoxitin sodium hydrate |
| ||
|
OMP_AN:33196 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27548 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:171741) Cerulenin |
| ||
|
OMP_AN:33197 |
OMP:0007903 |
decreased resistance to bile acids |
Relative to: OMP_AN:27585 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:23679061) Cholate sodium hydrate |
| ||
|
OMP_AN:33198 |
OMP:0007903 |
decreased resistance to bile acids |
Relative to: OMP_AN:27586 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9177) Deoxycholate sodium |
| ||
|
OMP_AN:33199 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27501 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:247956) Dibucaine |
| ||
|
OMP_AN:33200 |
OMP:0007912 |
decreased resistance to a chelator |
Relative to: OMP_AN:27507 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:64758) EDTA disodium salt dihydrate |
| ||
|
OMP_AN:33201 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27555 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:6093162) Fosfomycin disodium salt |
| ||
|
OMP_AN:33202 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27590 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:6093162 + CHEBI:4170) Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170) |
| ||
|
OMP_AN:33203 |
OMP:0006040 |
decreased resistance to quinolone |
Relative to: OMP_AN:27540 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:63598) Levofloxacin |
| ||
|
OMP_AN:33204 |
OMP:0007376 |
increased resistance to an alkylating agent |
Relative to: OMP_AN:27502 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:25255) methyl methanesulfonate (MMS) |
| ||
|
OMP_AN:33205 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27503 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:71415) Nitrofurantoin |
| ||
|
OMP_AN:33206 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27593 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:18357) (-)-Norepinephrine |
| ||
|
OMP_AN:33207 |
OMP:0007250 |
increased resistance to a chemical |
Relative to: OMP_AN:27573 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8431) Procaine hydrochloride |
| ||
|
OMP_AN:33208 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27553 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8642) Puromycin dihydrochloride |
| ||
|
OMP_AN:33209 |
OMP:0006041 |
increased resistance to quinolone |
Relative to: OMP_AN:27543 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9287) Streptonigrin |
| ||
|
OMP_AN:33210 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27516 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:445629) Thiolactomycin |
| ||
|
OMP_AN:33211 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27558 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:40009) D-Cycloserine |
| ||
|
OMP_AN:33212 |
OMP:0006061 |
decreased resistance to tetracycline |
Relative to: OMP_AN:27522 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:34730) Doxycycline hyclate |
| ||
|
OMP_AN:33213 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27500 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:45924) Trimethoprim |
| ||
|
OMP_AN:33214 |
OMP:0005097 |
increased resistance to UV radiation |
Relative to: OMP_AN:27619 Genotype differences: +lacZ4787(del)( +sspA757(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 2.21 2.22 2.23 2.24 2.25 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
o
- OMP:0005097 ! increased resistance to UV radiation
- OMP:0006040 ! decreased resistance to quinolone
- OMP:0006041 ! increased resistance to quinolone
- OMP:0006045 ! increased resistance to beta-lactam compound
- OMP:0006061 ! decreased resistance to tetracycline
- OMP:0007071 ! increased organic carbon source utilization
- OMP:0007074 ! increased growth factor requirement
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007250 ! increased resistance to a chemical
- OMP:0007376 ! increased resistance to alkylating agent
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007903 ! decreased resistance to bile acids
- OMP:0007912 ! decreased resistance to a chelator
