OMP ST:72556 ! Escherichia coli K-12 JW2077

Strain Summary

Strain Name	Escherichia coli K-12 JW2077
Synonyms	JW2077-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 gatB788(del)::FRT-kan-FRT
Strain Reference	PMID:16738554^[1] Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
edit table

Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:31107	OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27552 Genotype differences: +lacZ4787(del)( +gatB788(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Azidothymidine	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:10110) Azidothymidine	chemical concentration= 1 ng/ml normalized fitness= -3.53
OMP_AN:31108	OMP:0007888	increased resistance to a metal	Relative to: OMP_AN:27580 Genotype differences: +lacZ4787(del)( +gatB788(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Nickel stress-Ni(II)Cl2 hexahydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate	chemical concentration= 1 mM (LB) normalized fitness= 3.46
OMP_AN:31109	OMP:0007912	decreased resistance to a chelator	Relative to: OMP_AN:27508 Genotype differences: +lacZ4787(del)( +gatB788(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:EGTA	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:30740) EGTA	chemical concentration= 1 mM normalized fitness= -3.59
edit table

See Help:References for how to manage references in OMPwiki.

↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
↑ ^2.0 ^2.1 ^2.2 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page