OMP ST:72446 ! Escherichia coli K-12 JW1896

Strain Summary

Strain Name	Escherichia coli K-12 JW1896
Synonyms	JW1896-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 yecA758(del)::FRT-kan-FRT
Strain Reference	PMID:16738554^[1] Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
edit table

Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:30744	OMP:0007954	decreased population growth at high temperature	Relative to: OMP_AN:27621 Genotype differences: +lacZ4787(del)( +yecA758(del) -lacZ4787(del) Condition differences: temperature:43.5C medium37C medium	temperature:43.5C medium:LB agar medium:High temperature	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]		chemical concentration= 43.5 C normalized fitness= -3.97
OMP_AN:30745	OMP:0007912	decreased resistance to a chelator	Relative to: OMP_AN:27507 Genotype differences: +lacZ4787(del)( +yecA758(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:EDTA disodium salt dihydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:64758) EDTA disodium salt dihydrate	chemical concentration= 1 mM normalized fitness= -3.58
OMP_AN:30746	OMP:0006045	increased resistance to beta-lactam compound	Relative to: OMP_AN:27537 Genotype differences: +lacZ4787(del)( +yecA758(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Mecillinam	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:51208) Mecillinam	chemical concentration= 0.12 ug/ml normalized fitness= 3.27
edit table

See Help:References for how to manage references in OMPwiki.

↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
↑ ^2.0 ^2.1 ^2.2 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page