OMP ST:72026 ! Escherichia coli K-12 JW1284
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW1284 |
|---|---|
| Synonyms |
JW1284-1 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 sapD727(del)::FRT-kan-FRT |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:30132 |
OMP:0007895 |
increased resistance to a surfactant |
Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3020) Benzalkonium chloride |
| ||
|
OMP_AN:30133 |
OMP:0007902 |
increased resistance to bile acids |
Relative to: OMP_AN:27586 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9177) Deoxycholate sodium |
| ||
|
OMP_AN:30134 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27590 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:6093162 + CHEBI:4170) Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170) |
| ||
|
OMP_AN:30135 |
OMP:0006063 |
increased resistance to tetracycline |
Relative to: OMP_AN:27523 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:50697) Minocycline hydrochloride |
| ||
|
OMP_AN:30136 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27517 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:16760591) Nigericin sodium salt |
| ||
|
OMP_AN:30137 |
OMP:0006057 |
decreased resistance to aminoglycoside |
Relative to: OMP_AN:27526 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:5312) Gentamicin sulfate salt |
| ||
|
OMP_AN:30138 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27598 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride |
| ||
|
OMP_AN:30139 |
OMP:0007888 |
increased resistance to a metal |
Relative to: OMP_AN:27608 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride |
| ||
|
OMP_AN:30140 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27599 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O |
| ||
|
OMP_AN:30141 |
OMP:0007936 |
increased resistance to nutrient limitation |
Relative to: OMP_AN:27609 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O |
| ||
|
OMP_AN:30142 |
OMP:0007008 |
decreased population growth at acidic pH |
Relative to: OMP_AN:27622 Genotype differences: +lacZ4787(del)( +sapD727(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (**SID:329817955 SID:57651422) MES-HOMOPIPES |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
o
- OMP:0006057 ! decreased resistance to aminoglycoside
- OMP:0006063 ! increased resistance to tetracycline
- OMP:0007008 ! decreased growth at acidic pH
- OMP:0007074 ! increased growth factor requirement
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007888 ! increased resistance to a metal
- OMP:0007895 ! increased resistance to a surfactant
- OMP:0007902 ! increased resistance to bile acids
- OMP:0007936 ! increased resistance to nutrient limitation
