OMP ST:71886 ! Escherichia coli K-12 JW1041

Strain Summary

Strain Name	Escherichia coli K-12 JW1041
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)::rrnB-3 rph-1 lpxL(del)::FRT-kan-FRT
Strain Reference	PMID:16738554
Strain availability
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:29603		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27514 Genotype differences: +lpxL(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Chlorpromazine hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3649) Chlorpromazine hydrochloride	chemical concentration= 6 uM normalized fitness= -4.04
OMP_AN:29604		OMP:0006036	decreased resistance to macrolide	Relative to: OMP_AN:27520 Genotype differences: +lpxL(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Erythromycin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:42355) Erythromycin	chemical concentration= 5 ug/ml normalized fitness= -3.49
OMP_AN:29605		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27560 Genotype differences: +lpxL(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Bacitracin Zinc Sulfate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:16219032) Bacitracin Zinc Sulfate	chemical concentration= 100 ug/ml normalized fitness= -3.69
OMP_AN:29606		OMP:0006061	decreased resistance to tetracycline	Relative to: OMP_AN:27522 Genotype differences: +lpxL(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Doxycycline hyclate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:34730) Doxycycline hyclate	chemical concentration= 0.25 ug/ml normalized fitness= -3.62
OMP_AN:29607		OMP:0007912	decreased resistance to a chelator	Relative to: OMP_AN:27508 Genotype differences: +lpxL(del) Condition differences: no differences	temperature:37C medium:LB agar medium:EGTA	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:30740) EGTA	chemical concentration= 1 mM normalized fitness= -3.16
OMP_AN:29608		OMP:0006040	decreased resistance to quinolone	Relative to: OMP_AN:27541 Genotype differences: +lpxL(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Nalidixic acid sodium salt	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:3864541) Nalidixic acid sodium salt	chemical concentration= 2 ug/ml normalized fitness= -5.07
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References

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