OMP ST:71265 ! Escherichia coli K-12 JW0080
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW0080 |
|---|---|
| Synonyms |
JW0080-1 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 mraW788(del)::FRT-kan-FRT |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:27956 |
OMP:0006036 |
decreased resistance to macrolide |
Relative to: OMP_AN:27518 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:2955) Azithromycin |
| ||
|
OMP_AN:27957 |
OMP:0007250 |
increased resistance to a chemical |
Relative to: OMP_AN:27501 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:247956) Dibucaine |
| ||
|
OMP_AN:27958 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27606 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:506227) N-Acetyl-D-glucosamine |
| ||
|
OMP_AN:27959 |
OMP:0007071 |
increased organic carbon source utilization |
Relative to: OMP_AN:27616 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:506227) N-Acetyl-D-glucosamine |
| ||
|
OMP_AN:27960 |
OMP:0007250 |
increased resistance to a chemical |
Relative to: OMP_AN:27570 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:51240) Propidium iodide |
| ||
|
OMP_AN:27961 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27573 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8431) Procaine hydrochloride |
| ||
|
OMP_AN:27962 |
OMP:0007902 |
increased resistance to bile acids |
Relative to: OMP_AN:27584 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:23687511) Taurocholic acid sodium salt hydrate |
| ||
|
OMP_AN:27963 |
OMP:0006057 |
decreased resistance to aminoglycoside |
Relative to: OMP_AN:27529 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28864) Tobramycin |
| ||
|
OMP_AN:27964 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27588 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:164200) Triclosan/Irgasan |
| ||
|
OMP_AN:27965 |
OMP:0007913 |
increased resistance to a chelator |
Relative to: OMP_AN:27508 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:30740) EGTA |
| ||
|
OMP_AN:27966 |
OMP:0007250 |
increased resistance to a chemical |
Relative to: OMP_AN:27569 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:16236) EtOH |
| ||
|
OMP_AN:27967 |
OMP:0006058 |
increased resistance to aminoglycoside |
Relative to: OMP_AN:27527 Genotype differences: +lacZ4787(del)( +mraW788(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
o
- OMP:0006036 ! decreased resistance to macrolide
- OMP:0006057 ! decreased resistance to aminoglycoside
- OMP:0006058 ! increased resistance to aminoglycoside
- OMP:0007071 ! increased organic carbon source utilization
- OMP:0007074 ! increased growth factor requirement
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007250 ! increased resistance to a chemical
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007902 ! increased resistance to bile acids
- OMP:0007913 ! increased resistance to a chelator
