OMP ST:71106 ! Escherichia coli K-12 BW25113 lptA::SPA-kan

Strain Summary

Strain Name	Escherichia coli K-12 BW25113 lptA::SPA-kan
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 lptA::SPA-kan
Strain Reference	PMID:21185072
Strain availability
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
edit table

Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:37386		OMP:0006036	decreased resistance to macrolide	Relative to: OMP_AN:27518 Genotype differences: +lacZ4787(del)( +lptA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Azithromycin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:2955) Azithromycin	chemical concentration= 1 ug/ml normalized fitness= -3.98
OMP_AN:37387		OMP:0007896	decreased resistance to a surfactant	Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +lptA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Benzalkonium chloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3020) Benzalkonium chloride	chemical concentration= 25 ug/ml normalized fitness= -3.81
OMP_AN:37388		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27514 Genotype differences: +lacZ4787(del)( +lptA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Chlorpromazine hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3649) Chlorpromazine hydrochloride	chemical concentration= 6 uM normalized fitness= -9.16
OMP_AN:37389		OMP:0006036	decreased resistance to macrolide	Relative to: OMP_AN:27519 Genotype differences: +lacZ4787(del)( +lptA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Clarithromycin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3732) Clarithromycin	chemical concentration= 5 ug/ml normalized fitness= -4.06
OMP_AN:37390		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27588 Genotype differences: +lacZ4787(del)( +lptA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Triclosan/Irgasan	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:164200) Triclosan/Irgasan	chemical concentration= 0.05 ug/ml normalized fitness= -5.04
OMP_AN:37391		OMP:0006061	decreased resistance to tetracycline	Relative to: OMP_AN:27522 Genotype differences: +lacZ4787(del)( +lptA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Doxycycline hyclate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:34730) Doxycycline hyclate	chemical concentration= 1 ug/ml normalized fitness= -7.86
OMP_AN:37392		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27500 Genotype differences: +lacZ4787(del)( +lptA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Trimethoprim	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:45924) Trimethoprim	chemical concentration= 0.4 ug/ml normalized fitness= -3.7
edit table

References

See Help:References for how to manage references in OMPwiki.