OMP ST:71080 ! Escherichia coli K-12 BW25113 ligA::SPA-kan

Strain Summary

Strain Name	Escherichia coli K-12 BW25113 ligA::SPA-kan
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 ligA::SPA-kan
Strain Reference	PMID:21185072
Strain availability
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:37372		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27510 Genotype differences: +lacZ4787(del)( +ligA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Mitomycin C	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:27504) Mitomycin C	chemical concentration= 0.1 ug/ml normalized fitness= -3.54
OMP_AN:37373		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27573 Genotype differences: +lacZ4787(del)( +ligA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Procaine hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:8431) Procaine hydrochloride	chemical concentration= 10 mM normalized fitness= -3.2
OMP_AN:37374		OMP:0006040	decreased resistance to quinolone	Relative to: OMP_AN:27543 Genotype differences: +lacZ4787(del)( +ligA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Streptonigrin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:9287) Streptonigrin	chemical concentration= 0.5 ug/ml normalized fitness= -3.26
OMP_AN:37375		OMP:0006040	decreased resistance to quinolone	Relative to: OMP_AN:27539 Genotype differences: +lacZ4787(del)( +ligA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Ciprofloxacin hydrochloride hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate	chemical concentration= 0.008 ug/ml normalized fitness= -3.63
OMP_AN:37376		OMP:0006040	decreased resistance to quinolone	Relative to: OMP_AN:27542 Genotype differences: +lacZ4787(del)( +ligA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Norfloxacin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:100246) Norfloxacin	chemical concentration= 0.04 ug/ml normalized fitness= -4.97
OMP_AN:37377		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27500 Genotype differences: +lacZ4787(del)( +ligA -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Trimethoprim	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:45924) Trimethoprim	chemical concentration= 0.4 ug/ml normalized fitness= -3.33
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References

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