OMP ST:71070 ! Escherichia coli K-12 BW25113 infC::SPA-kan

Strain Summary

Strain Name	Escherichia coli K-12 BW25113 infC::SPA-kan
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 infC::SPA-kan
Strain Reference	PMID:21185072
Strain availability
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:37345		OMP:0007953	increased population growth at high temperature	Relative to: OMP_AN:27621 Genotype differences: +lacZ4787(del)( +infC -lacZ4787(del) Condition differences: temperature:45C medium37C medium	temperature:45C medium:LB agar medium:High temperature	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072		chemical concentration= 45 C normalized fitness= 3.49
OMP_AN:37346		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27556 Genotype differences: +lacZ4787(del)( +infC -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Bicyclomycin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:60584) Bicyclomycin	chemical concentration= 1 ug/ml normalized fitness= -4.11
OMP_AN:37347		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27510 Genotype differences: +lacZ4787(del)( +infC -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Mitomycin C	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:27504) Mitomycin C	chemical concentration= 0.1 ug/ml normalized fitness= -3.96
OMP_AN:37348		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27533 Genotype differences: +lacZ4787(del)( +infC -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Carbenicillin disodium	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:34609) Carbenicillin disodium	chemical concentration= 1.5 ug/ml normalized fitness= -4.02
OMP_AN:37349		OMP:0006041	increased resistance to quinolone	Relative to: OMP_AN:27539 Genotype differences: +lacZ4787(del)( +infC -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Ciprofloxacin hydrochloride hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate	chemical concentration= 0.008 ug/ml normalized fitness= 3.63
OMP_AN:37350		OMP:0006061	decreased resistance to tetracycline	Relative to: OMP_AN:27522 Genotype differences: +lacZ4787(del)( +infC -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Doxycycline hyclate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:34730) Doxycycline hyclate	chemical concentration= 0.75 ug/ml normalized fitness= -5.99
OMP_AN:37351		OMP:0007521	decreased population growth in high osmolarity	Relative to: OMP_AN:27595 Genotype differences: +lacZ4787(del)( +infC -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:NaCl	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:26710) NaCl	chemical concentration= 450 mM normalized fitness= -3.49
OMP_AN:37352		OMP:0006057	decreased resistance to aminoglycoside	Relative to: OMP_AN:27527 Genotype differences: +lacZ4787(del)( +infC -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Spectinomycin dihydrochloride pentahydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate	chemical concentration= 6 ug/ml normalized fitness= -6.2
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References

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