OMP ST:1295 ! Escherichia coli K-12 JW3594
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW3594 |
|---|---|
| Synonyms |
JW3594-1 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 rfaD731(del)::kan |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:1155 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rfaD731(del) -IN(rrnD-rrnE)1 Condition differences: no differences |
|
ECO:0005803 |
motility assay evidence |
||||
|
OMP_AN:1156 |
OMP:0007093 |
decreased cell motility by swimming |
Relative to: OMP_AN:882 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rfaD731(del) -IN(rrnD-rrnE)1 Condition differences: no differences |
|
ECO:0005803 |
motility assay evidence |
||||
|
OMP_AN:33756 |
OMP:0007954 |
decreased population growth at high temperature |
Relative to: OMP_AN:27621 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences:
|
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
|
OMP_AN:33757 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27557 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:2830968) A22 |
| ||
|
OMP_AN:33758 |
OMP:0007896 |
decreased resistance to a surfactant |
Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3020) Benzalkonium chloride |
| ||
|
OMP_AN:33759 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27571 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3259) CCCP (Carbonyl cyanide 3-chlorophenylhydrazone) |
| ||
|
OMP_AN:33760 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27548 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:171741) Cerulenin |
| ||
|
OMP_AN:33761 |
OMP:0006036 |
decreased resistance to macrolide |
Relative to: OMP_AN:27519 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3732) Clarithromycin |
| ||
|
OMP_AN:33762 |
OMP:0007886 |
decreased resistance to a metal |
Relative to: OMP_AN:27579 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:86318) Copper stress-CuCl2 dihydrate |
| ||
|
OMP_AN:33763 |
OMP:0007903 |
decreased resistance to bile acids |
Relative to: OMP_AN:27586 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9177) Deoxycholate sodium |
| ||
|
OMP_AN:33764 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27501 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:247956) Dibucaine |
| ||
|
OMP_AN:33765 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27550 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:4883) Ethidium Bromide |
| ||
|
OMP_AN:33766 |
OMP:0006045 |
increased resistance to beta-lactam compound |
Relative to: OMP_AN:27537 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:51208) Mecillinam |
| ||
|
OMP_AN:33767 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27513 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8055) Phenazine methosulfate (PMS) |
| ||
|
OMP_AN:33768 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27553 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8642) Puromycin dihydrochloride |
| ||
|
OMP_AN:33769 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27546 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8653) Pyocyanin |
| ||
|
OMP_AN:33770 |
OMP:0006040 |
decreased resistance to quinolone |
Relative to: OMP_AN:27543 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9287) Streptonigrin |
| ||
|
OMP_AN:33771 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27588 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:164200) Triclosan/Irgasan |
| ||
|
OMP_AN:33772 |
OMP:0007896 |
decreased resistance to a surfactant |
Relative to: OMP_AN:27583 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9750) Triton X-100 |
| ||
|
OMP_AN:33773 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27566 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9932) Vancomycin HCl hydrate |
| ||
|
OMP_AN:33774 |
OMP:0006040 |
decreased resistance to quinolone |
Relative to: OMP_AN:27541 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:3864541) Nalidixic acid sodium salt |
| ||
|
OMP_AN:33775 |
OMP:0006057 |
decreased resistance to aminoglycoside |
Relative to: OMP_AN:27527 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ 1.0 1.1 Inoue, T et al. (2007) Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. J. Bacteriol. 189 950-7 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
e
o
- OMP:0006036 ! decreased resistance to macrolide
- OMP:0006040 ! decreased resistance to quinolone
- OMP:0006045 ! increased resistance to beta-lactam compound
- OMP:0006057 ! decreased resistance to aminoglycoside
- OMP:0007092 ! decreased motility by swarming
- OMP:0007093 ! decreased cell motility by swimming
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007886 ! decreased resistance to a metal
- OMP:0007896 ! decreased resistance to a surfactant
- OMP:0007903 ! decreased resistance to bile acids
