OMP ST:1214 ! Escherichia coli K-12 JW0451

Strain Summary

Strain Name	Escherichia coli K-12 JW0451
Synonyms	BW25113 acrB747(del)::kan, ECK0456
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 acrB747(del)::kan
Strain Reference	other:CGSC PMID:16738554^[1]
Strain availability	CGSC
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Notes

Phenotype Annotation

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Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	Reference	Annotation Extension	Notes
OMP_AN:1098	OMP:0005347		Relative to: OMP_AN:817 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:procaine (30 ug ml-1)	PMID:21185072^[2]	CHEBI:8430 procaine	fitness score = 7.16
OMP_AN:1100	OMP:0007249	Increased sensitivity to a chemical	Relative to: OMP_AN:1099 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:EGTA (2.0 ug ml-1)	PMID:21185072^[2]	CHEBI:30740 EGTA	fitness score = 3.83
OMP_AN:1102	OMP:0007249	Increased sensitivity to a chemical	Relative to: OMP_AN:1101 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:polymixin B (6.0 ug ml-1)	PMID:21185072^[2]	CHEBI:8309 polymixin B	fitness score = 4.02
OMP_AN:1104	OMP:0007174	increased resistance to antimicrobial peptide	Relative to: OMP_AN:1103 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:vancomycin (10 ug ml-1)	PMID:21185072^[2]	CHEBI:28001 vancomycin	fitness score = 3.80
OMP_AN:1105	OMP:0006041	increased resistance to quinolone	Relative to: OMP_AN:703 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:doxorubicin (1.0 ug ml-1)	PMID:21185072^[2]	CHEBI:28748 doxorubicin	fitness score = 3.70
OMP_AN:1107	OMP:0007249	Increased sensitivity to a chemical	Relative to: OMP_AN:1106 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:cholate 0.1%	PMID:21185072^[2]	CHEBI:29747 cholate	fitness score = 3.67
OMP_AN:1109	OMP:0006045	increased resistance to beta-lactam compound	Relative to: OMP_AN:1108 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:amoxicillin (1.5 ug ml-1)	PMID:21185072^[2]	CHEBI:2676 amoxicillin	itness score = 3.56
OMP_AN:1111	OMP:0006045	increased resistance to beta-lactam compound	Relative to: OMP_AN:1110 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:ampicillin (2.0 ug ml-1)	PMID:21185072^[2]	CHEBI:28971 ampicillin	fitness score = 3.28
OMP_AN:1113	OMP:0006045	increased resistance to beta-lactam compound	Relative to: OMP_AN:1112 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:aztreonam (0.002 ug ml-1)	PMID:21185072^[2]	CHEBI:161680 aztreonam	fitness score = 3.16
OMP_AN:1115	OMP:0005097	increased resistance to UV radiation	Relative to: OMP_AN:1114 Genotype differences: +lacZ4787(del)( +acrB747(del) -lacZ4787(del) Condition differences: no differences	medium:UV (24 seconds)	PMID:21185072^[2]		fitness score = 3.20

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References

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Jump up ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
↑ ^{Jump up to: 2.00} ^2.01 ^2.02 ^2.03 ^2.04 ^2.05 ^2.06 ^2.07 ^2.08 ^2.09 ^2.10 ^2.11 ^2.12 ^2.13 ^2.14 ^2.15 ^2.16 ^2.17 ^2.18 ^2.19 ^2.20 ^2.21 ^2.22 ^2.23 ^2.24 ^2.25 ^2.26 ^2.27 ^2.28 ^2.29 ^2.30 ^2.31 ^2.32 ^2.33 ^2.34 ^2.35 ^2.36 ^2.37 ^2.38 ^2.39 ^2.40 ^2.41 ^2.42 ^2.43 ^2.44 ^2.45 ^2.46 ^2.47 ^2.48 ^2.49 ^2.50 ^2.51 ^2.52 ^2.53 ^2.54 ^2.55 ^2.56 ^2.57 ^2.58 ^2.59 ^2.60 ^2.61 ^2.62 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page

[PMID:16738554-1] Jump up ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page

[PMID:21185072-2] {Jump up to: 2.00} ^2.01 ^2.02 ^2.03 ^2.04 ^2.05 ^2.06 ^2.07 ^2.08 ^2.09 ^2.10 ^2.11 ^2.12 ^2.13 ^2.14 ^2.15 ^2.16 ^2.17 ^2.18 ^2.19 ^2.20 ^2.21 ^2.22 ^2.23 ^2.24 ^2.25 ^2.26 ^2.27 ^2.28 ^2.29 ^2.30 ^2.31 ^2.32 ^2.33 ^2.34 ^2.35 ^2.36 ^2.37 ^2.38 ^2.39 ^2.40 ^2.41 ^2.42 ^2.43 ^2.44 ^2.45 ^2.46 ^2.47 ^2.48 ^2.49 ^2.50 ^2.51 ^2.52 ^2.53 ^2.54 ^2.55 ^2.56 ^2.57 ^2.58 ^2.59 ^2.60 ^2.61 ^2.62 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page

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OMP ST:1214 ! Escherichia coli K-12 JW0451

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Strain Summary

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Phenotype Annotation

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