OMP ST:1160 ! Escherichia coli K-12 JW3605
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW3605 |
|---|---|
| Synonyms |
JW3605-1 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 rfaP741(del)::kan |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:1076 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rfaP741(del) -IN(rrnD-rrnE)1 Condition differences: no differences |
|
ECO:0005803 |
motility assay evidence |
||||
|
OMP_AN:1148 |
OMP:0005324 |
altered cell motility by swimming |
Relative to: OMP_AN:882 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rfaP741(del) -IN(rrnD-rrnE)1 Condition differences: no differences |
|
ECO:0005803 |
motility assay evidence |
||||
|
OMP_AN:33848 |
OMP:0007959 |
increased population growth at low temperature |
Relative to: OMP_AN:27620 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences:
|
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
|
OMP_AN:33849 |
OMP:0006045 |
increased resistance to beta-lactam compound |
Relative to: OMP_AN:27530 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:2676) Amoxicillin |
| ||
|
OMP_AN:33850 |
OMP:0006036 |
decreased resistance to macrolide |
Relative to: OMP_AN:27518 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:2955) Azithromycin |
| ||
|
OMP_AN:33851 |
OMP:0006045 |
increased resistance to beta-lactam compound |
Relative to: OMP_AN:27535 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31380) Cefsulodin sodium salt hydrate |
| ||
|
OMP_AN:33852 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27535 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31380) Cefsulodin sodium salt hydrate |
| ||
|
OMP_AN:33853 |
OMP:0007902 |
increased resistance to bile acids |
Relative to: OMP_AN:27585 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:23679061) Cholate sodium hydrate |
| ||
|
OMP_AN:33854 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27550 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:4883) Ethidium Bromide |
| ||
|
OMP_AN:33855 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27603 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42758) D-Glucose anhydrous |
| ||
|
OMP_AN:33856 |
OMP:0007071 |
increased organic carbon source utilization |
Relative to: OMP_AN:27613 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42758) D-Glucose anhydrous |
| ||
|
OMP_AN:33857 |
OMP:0007250 |
increased resistance to a chemical |
Relative to: OMP_AN:27570 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:51240) Propidium iodide |
| ||
|
OMP_AN:33858 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27513 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8055) Phenazine methosulfate (PMS) |
| ||
|
OMP_AN:33859 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27564 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75044) Phleomycin |
| ||
|
OMP_AN:33860 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27553 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8642) Puromycin dihydrochloride |
| ||
|
OMP_AN:33861 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27546 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8653) Pyocyanin |
| ||
|
OMP_AN:33862 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27567 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28177) Theophylline anhydrous |
| ||
|
OMP_AN:33863 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27588 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:164200) Triclosan/Irgasan |
| ||
|
OMP_AN:33864 |
OMP:0007521 |
decreased population growth in high osmolarity |
Relative to: OMP_AN:27595 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:26710) NaCl |
| ||
|
OMP_AN:33865 |
OMP:0007008 |
decreased population growth at acidic pH |
Relative to: OMP_AN:27622 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (**SID:329817955 SID:57651422) MES-HOMOPIPES |
| ||
|
OMP_AN:33866 |
OMP:0007009 |
increased population growth at acidic pH |
Relative to: OMP_AN:27622 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (**SID:329817955 SID:57651422) MES-HOMOPIPES |
| ||
|
OMP_AN:33867 |
OMP:0006057 |
decreased resistance to aminoglycoside |
Relative to: OMP_AN:27527 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate |
| ||
|
OMP_AN:33868 |
OMP:0006063 |
increased resistance to tetracycline |
Relative to: OMP_AN:27524 Genotype differences: +lacZ4787(del)( +rfaP741(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:35006) Tetracycline hydrochloride |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ 1.0 1.1 Inoue, T et al. (2007) Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. J. Bacteriol. 189 950-7 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
e
o
- OMP:0005324 ! altered cell motility by swimming
- OMP:0006036 ! decreased resistance to macrolide
- OMP:0006044 ! decreased resistance to beta-lactam
- OMP:0006045 ! increased resistance to beta-lactam compound
- OMP:0006057 ! decreased resistance to aminoglycoside
- OMP:0006063 ! increased resistance to tetracycline
- OMP:0007008 ! decreased growth at acidic pH
- OMP:0007009 ! increased growth at acidic pH
- OMP:0007071 ! increased organic carbon source utilization
- OMP:0007074 ! increased growth factor requirement
- OMP:0007092 ! decreased motility by swarming
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007250 ! increased resistance to a chemical
- OMP:0007521 ! decreased population growth in high osmolarity
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007902 ! increased resistance to bile acids
