OMP ST:1142 ! Escherichia coli K-12 JW5646
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW5646 |
|---|---|
| Synonyms |
JW5646-3 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 envC725(del)::kan |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:1058 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +envC725(del) -IN(rrnD-rrnE)1 Condition differences: no differences |
|
ECO:0005803 |
motility assay evidence |
||||
|
OMP_AN:36591 |
OMP:0006045 |
increased resistance to beta-lactam compound |
Relative to: OMP_AN:27530 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:2676) Amoxicillin |
| ||
|
OMP_AN:36592 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27531 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28971) Ampicillin |
| ||
|
OMP_AN:36593 |
OMP:0007895 |
increased resistance to a surfactant |
Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3020) Benzalkonium chloride |
| ||
|
OMP_AN:36594 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27549 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:134107 CID:11546620) CHIR-090 |
| ||
|
OMP_AN:36595 |
OMP:0006037 |
increased resistance to macrolide |
Relative to: OMP_AN:27519 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3732) Clarithromycin |
| ||
|
OMP_AN:36596 |
OMP:0007903 |
decreased resistance to bile acids |
Relative to: OMP_AN:27586 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9177) Deoxycholate sodium |
| ||
|
OMP_AN:36597 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27501 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:247956) Dibucaine |
| ||
|
OMP_AN:36598 |
OMP:0007912 |
decreased resistance to a chelator |
Relative to: OMP_AN:27507 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:64758) EDTA disodium salt dihydrate |
| ||
|
OMP_AN:36599 |
OMP:0007250 |
increased resistance to a chemical |
Relative to: OMP_AN:27572 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:4806) Epigallocatechin gallate (EGCG) |
| ||
|
OMP_AN:36600 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27545 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:6030) Isoniazid |
| ||
|
OMP_AN:36601 |
OMP:0007250 |
increased resistance to a chemical |
Relative to: OMP_AN:27593 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:18357) (-)-Norepinephrine |
| ||
|
OMP_AN:36602 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27547 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:16240) Hydrogen peroxide |
| ||
|
OMP_AN:36603 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27588 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:164200) Triclosan/Irgasan |
| ||
|
OMP_AN:36604 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27560 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:16219032) Bacitracin Zinc Sulfate |
| ||
|
OMP_AN:36605 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27533 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:34609) Carbenicillin disodium |
| ||
|
OMP_AN:36606 |
OMP:0006040 |
decreased resistance to quinolone |
Relative to: OMP_AN:27539 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate |
| ||
|
OMP_AN:36607 |
OMP:0007912 |
decreased resistance to a chelator |
Relative to: OMP_AN:27508 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:30740) EGTA |
| ||
|
OMP_AN:36608 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27504 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31924) Novobiocin sodium salt |
| ||
|
OMP_AN:36609 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27500 Genotype differences: +lacZ4787(del)( +envC725(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:45924) Trimethoprim |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Inoue, T et al. (2007) Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. J. Bacteriol. 189 950-7 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
e
o
- OMP:0006037 ! increased resistance to macrolide
- OMP:0006040 ! decreased resistance to quinolone
- OMP:0006044 ! decreased resistance to beta-lactam
- OMP:0006045 ! increased resistance to beta-lactam compound
- OMP:0007092 ! decreased motility by swarming
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007250 ! increased resistance to a chemical
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007895 ! increased resistance to a surfactant
- OMP:0007903 ! decreased resistance to bile acids
- OMP:0007912 ! decreased resistance to a chelator
