OMP ST:1104 ! Escherichia coli K-12 JW0196

Strain Summary

Strain Name	Escherichia coli K-12 JW0196
Synonyms	JW0196-2
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 gmhB725(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:1020		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +gmhB725(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:1140		OMP:0005324	altered cell motility by swimming	Relative to: OMP_AN:882 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +gmhB725(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:28115		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27594 Genotype differences: +lacZ4787(del)( +gmhB725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:SDS (CHEBI:8984) +EDTA (CHEBI:64758)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:64758 + CHEBI:8984) SDS (CHEBI:8984) +EDTA (CHEBI:64758)	chemical concentration= 0.5%/0.5mM %/0.5mM normalized fitness= -4.05
OMP_AN:28116		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27546 Genotype differences: +lacZ4787(del)( +gmhB725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Pyocyanin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:8653) Pyocyanin	chemical concentration= 10 ug/ml normalized fitness= -5.42
OMP_AN:28117		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27588 Genotype differences: +lacZ4787(del)( +gmhB725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Triclosan/Irgasan	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:164200) Triclosan/Irgasan	chemical concentration= 0.05 ug/ml normalized fitness= -3.55
OMP_AN:28118		OMP:0006041	increased resistance to quinolone	Relative to: OMP_AN:27539 Genotype differences: +lacZ4787(del)( +gmhB725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Ciprofloxacin hydrochloride hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate	chemical concentration= 0.008 ug/ml normalized fitness= 3.39
OMP_AN:28119		OMP:0006041	increased resistance to quinolone	Relative to: OMP_AN:27542 Genotype differences: +lacZ4787(del)( +gmhB725(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Norfloxacin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:100246) Norfloxacin	chemical concentration= 0.04 ug/ml normalized fitness= 4.39
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References

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