OMP ST:929 ! Escherichia coli K-12 YK3012

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Revision as of 17:29, 24 February 2017 by Siegele (talk | contribs) (Table edited by Siegele via TableEdit)

Strain Summary

Strain Name

YK3012

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

F- lambda- e14-(?) Rac-0(?) uvrC34 hisG4(Oc) rfbC1 mgl-51 rpsL31(strR) kdgK51 xylA5 mtl-1 argE3(Oc) thiE1 thyA galU51 pyrC46 nalA flgE2008(Am) flgE3012(pseudorevertant)

Strain Reference
Strain availability
Ancestry

parent:OMP ST:928 ! Escherichia coli K-12 YK2008

Annotated phenotypes



Notes

The paper[2] refers to the flgE gene by the older name, flaK.

For the flgE3012 mutation, the allele number was added based on the pattern, seen in other papers from the Simon lab, of naming alleles based on strain numbers. Siegele (talk) 13:44, 18 July 2016 (CDT)

Not available in CGSC.

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:695

OMP:0000045

increased cell motility

Relative to: OMP_AN:692


Genotype differences:

+flgE3012(pseudorevertant)


Condition differences:

no differences

medium:Motility agar

PMID:338588[2]

OMP_AN:696

NOT

OMP:0007243

altered bacteriophage sensitivity

Relative to: OMP_AN:694


Genotype differences:

+flgE3012(pseudorevertant)


Condition differences:

no differences

PMID:338588[2]

Taxonomy ID: 1541887 Phage Chi

Mock row

OMP_AN:840

same phenotype as reference strain

OMP:0007245

abolished sensitivity to bacteriophage

Relative to: OMP_AN:694


Genotype differences:

+flgE3012(pseudorevertant)


Condition differences:

no differences

PMID:338588[2]

Taxonomy ID: 1541887 Phage Chi




Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. Komeda, Y et al. (1977) Genetic analysis of Escherichia coli K-12 region I flagellar mutants. J. Bacteriol. 131 801-8 PubMed OMPwiki page
  2. 2.0 2.1 2.2 2.3 2.4 Komeda, Y et al. (1978) Identification of the structural gene for the hook subunit protein of Escherichia coli flagella. J. Bacteriol. 133 364-71 PubMed OMPwiki page