OMP ST:6326 ! Escherichia coli UPEC CFT073

Strain Summary

Strain Name	Escherichia coli UPEC CFT073
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: UPEC NCBI Taxonomy ID: 199310
Genotype
Strain Reference
Strain availability	ATCC 700928
Ancestry
Annotated phenotypes
edit table

Phenotype Annotation

Annotation ID	not	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:7515		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	other:p(PfliC)-lux temperature:37C medium:0.4% glucose medium:M9 minimal medium	ECO:0000049	reporter gene assay evidence	PMID:21821749	UniProtKB:A0A0H2VAE3
OMP_AN:7516		OMP:0000268	decreased gene expression	Relative to: OMP_AN:7515 Genotype differences: no differences Condition differences: medium:cPACs (0.1 mg/mL)?	other:p(PfliC)-lux temperature:37C medium:0.4% glucose medium:M9 minimal medium medium:cPACs (0.1 mg/mL)	ECO:0000049	reporter gene assay evidence	PMID:21821749	UniProtKB:A0A0H2VAE3 CHEBI:26267 cranberry-derived proanthocyanidins (cPACs)
OMP_AN:7517		OMP:0000029	presence of flagellum	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB broth	ECO:0005033	electron microscopy evidence	PMID:21821749
OMP_AN:7518		OMP:0000215	decreased number of flagella	Relative to: OMP_AN:7517 Genotype differences: no differences Condition differences: medium:CP (10 mg/mL)?	temperature:37C medium:CP (10 mg/mL) medium:LB broth	ECO:0005033	electron microscopy evidence	PMID:21821749	NCBI Taxonomy ID:13750 cranberry powder (CP)
OMP_AN:7519		OMP:0000111	presence of cell motility by swimming	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:21821749
OMP_AN:7520		OMP:0007093	decreased cell motility by swimming	Relative to: OMP_AN:7519 Genotype differences: no differences Condition differences: medium:cPACs (0.1 mg/mL)?	temperature:37C medium:cPACs (0.1 mg/mL) medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:21821749	CHEBI:26267 cranberry-derived proanthocyanidins (cPACs)
OMP_AN:7521		OMP:0006100	abolished cell motility by swimming	Relative to: OMP_AN:7519 Genotype differences: no differences Condition differences: medium:? CP (10 mg/mL)?	temperature:37C medium:? CP (10 mg/mL) medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:21821749	NCBI Taxonomy ID:13750 cranberry powder (CP)
OMP_AN:7522		OMP:0000067	presence of cell motility by swarming	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:21821749
OMP_AN:7523		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:7522 Genotype differences: no differences Condition differences: medium:cPACs (0.1 mg/mL)?	temperature:37C medium:cPACs (0.1 mg/mL) medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:21821749	CHEBI:26267 cranberry-derived proanthocyanidins (cPACs)
OMP_AN:7524		OMP:0006167	abolished cell motility by swarming	Relative to: OMP_AN:7522 Genotype differences: no differences Condition differences: medium:? CP (10 mg/mL)?	temperature:37C medium:swarming motility medium medium:? CP (10 mg/mL)	ECO:0005803	motility assay evidence	PMID:21821749	NCBI Taxonomy ID:13750 cranberry powder (CP)
OMP_AN:7525		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	other:p(PfliC)-lux temperature:37C medium:LB medium	ECO:0000049	reporter gene assay evidence	PMID:22708802	UniProtKB:A0A0H2VAE3
OMP_AN:7526		OMP:0000268	decreased gene expression	Relative to: OMP_AN:7525 Genotype differences: no differences Condition differences: medium:? PG (1%)?	other:p(PfliC)-lux temperature:37C medium:? PG (1%) medium:LB medium	ECO:0000049	reporter gene assay evidence	PMID:22708802	UniProtKB:A0A0H2VAE3 NCBI Taxonomy ID:22663	Punicalagin (PG) is found in pomegranate tannins
OMP_AN:7527		OMP:0000268	decreased gene expression	Relative to: OMP_AN:7525 Genotype differences: no differences Condition differences: medium:? PGP (1%)?	other:p(PfliC)-lux temperature:37C medium:? PGP (1%) medium:LB medium	ECO:0000049	reporter gene assay evidence	PMID:22708802	UniProtKB:A0A0H2VAE3 NCBI Taxonomy ID:22663	Pomegranate fruit powder (PGP) was tested
OMP_AN:7528		OMP:0000268	decreased gene expression	Relative to: OMP_AN:7525 Genotype differences: no differences Condition differences: medium:? PGRE (1%)?	other:p(PfliC)-lux temperature:37C medium:? PGRE (1%) medium:LB medium	ECO:0000049	reporter gene assay evidence	PMID:22708802	UniProtKB:A0A0H2VAE3 NCBI Taxonomy ID:22663	Pomegranate rind extract (PGRE) was tested
edit table

References

See Help:References for how to manage references in OMPwiki.