OMP ST:929 ! Escherichia coli K-12 YK3012

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Revision as of 13:33, 11 August 2016 by Siegele (talk | contribs)

Strain Summary

Strain Name

YK3012

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

F- lambda- his- argE thyA galU thi strA uvrC mtl xyl pyrC46 nalA flgE2008(Am) flgE3012(pseudorevertant)

Strain Reference

PMID:330498[1]

Strain availability
Ancestry

parent:OMP ST:928 ! Escherichia coli K-12 YK2008

Annotated phenotypes



Notes

The paper[2] refers to the flgE gene by the older name, flaK.

For the flgE3012 mutation, the allele number was added based on the pattern, seen in other papers from the Simon lab, of naming alleles based on strain numbers. Siegele (talk) 13:44, 18 July 2016 (CDT)

Not available in CGSC.

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:695

OMP:0000045

increased cell motility

Relative to: OMP_AN:692


Genotype differences:

+flgE3012(pseudorevertant)


Condition differences:

no differences

medium:Motility agar

PMID:338588[2]

OMP_AN:696

NOT

OMP:0007243

altered bacteriophage sensitivity

Relative to: OMP_AN:694


Genotype differences:

+flgE3012(pseudorevertant)


Condition differences:

no differences

PMID:338588[2]

Taxonomy ID: 1541887 Phage Chi

OMP_AN:840

same as parent

OMP:0007245

abolished sensitivity to bacteriophage

Relative to: OMP_AN:694


Genotype differences:

+his- +argE +galU +thi +strA +uvrC +mtl +xyl +flgE3012(pseudorevertant) -e14-(?) -Rac-0(?) -uvrC34 -hisG4(Oc) -rfbC1 -mgl-51 -rpsL31(strR) -kdgK51 -xylA5 -mtl-1 -argE3(Oc) -thiE1 -galU51


Condition differences:

no differences




Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. Komeda, Y et al. (1977) Genetic analysis of Escherichia coli K-12 region I flagellar mutants. J. Bacteriol. 131 801-8 PubMed OMPwiki page
  2. 2.0 2.1 2.2 Komeda, Y et al. (1978) Identification of the structural gene for the hook subunit protein of Escherichia coli flagella. J. Bacteriol. 133 364-71 PubMed OMPwiki page