OMP ST:776 ! Escherichia coli K-12 AB1886

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Strain Summary

Strain Name

AB1886

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: Taxon: K-12
  • NCBI Taxonomy ID: NCBI Taxon ID: 83333
Genotype

DE(gpt-proA)62 F- Lambda- Rac-0 araC14 argE3(Oc) galK2(Oc) glnX44(AS) hisG4(Oc) kdgK51 lacY1 leuB6(Am) mgl-51 mtl-1 qsr'-0 rfbC1 rpoS396(Am) rpsL31(strR) thiE1 thr-1 tsx-33 uvrA6 xylA5

Strain Reference

PMID:5335128[1]

Strain availability

CGSC# 1886

Ancestry

parent:AB1157

Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:61

OMP:0007204

decreased resistance to UV-A radiation

Relative to: OMP_AN:52

Genotype differences:

+other:DE(gpt-proA)62 +other:F- +other:Lambda- +other:Rac-0 +other:araC14 +other:argE3(Oc) +other:galK2(Oc) +other:glnX44(AS) +other:hisG4(Oc) +other:kdgK51 +other:lacY1 +other:leuB6(Am) +other:mgl-51 +other:mtl-1 +other:qsr'-0 +other:rfbC1 +other:rpoS396(Am) +other:rpsL31(strR) +other:thiE1 +other:thr-1 +other:tsx-33 +other:uvrA6 +other:xylA5 -DE(gpt-proA)62 -F- -Lambda- -Rac-0 -araC14 -argE3(Oc) -galK2(Oc) -glnX44(AS) -hisG4(Oc) -kdgK51 -lacY1 -leuB6(Am) -mgl-51 -mtl-1 -qsr'-0 -rfbC1 -rpoS396(Am) -rpsL31(strR) -thiE1 -thr-1 -tsx-33 -xylA5

Condition differences:

no differences

  • other:8-MOP (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 1

OMP_AN:62

NOT

OMP:0005125

altered UV radiation resistance

Relative to: OMP_AN:53

Genotype differences:

+other:DE(gpt-proA)62 +other:F- +other:Lambda- +other:Rac-0 +other:araC14 +other:argE3(Oc) +other:galK2(Oc) +other:glnX44(AS) +other:hisG4(Oc) +other:kdgK51 +other:lacY1 +other:leuB6(Am) +other:mgl-51 +other:mtl-1 +other:qsr'-0 +other:rfbC1 +other:rpoS396(Am) +other:rpsL31(strR) +other:thiE1 +other:thr-1 +other:tsx-33 +other:uvrA6 +other:xylA5 -DE(gpt-proA)62 -F- -Lambda- -Rac-0 -araC14 -argE3(Oc) -galK2(Oc) -glnX44(AS) -hisG4(Oc) -kdgK51 -lacY1 -leuB6(Am) -mgl-51 -mtl-1 -qsr'-0 -rfbC1 -rpoS396(Am) -rpsL31(strR) -thiE1 -thr-1 -tsx-33 -xylA5

Condition differences:

no differences

  • other:3-CPs (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 2

OMP_AN:63

OMP:0007201

decreased resistance to UV-C radiation

Relative to: OMP_AN:56

Genotype differences:

+other:DE(gpt-proA)62 +other:F- +other:Lambda- +other:Rac-0 +other:araC14 +other:argE3(Oc) +other:galK2(Oc) +other:glnX44(AS) +other:hisG4(Oc) +other:kdgK51 +other:lacY1 +other:leuB6(Am) +other:mgl-51 +other:mtl-1 +other:qsr'-0 +other:rfbC1 +other:rpoS396(Am) +other:rpsL31(strR) +other:thiE1 +other:thr-1 +other:tsx-33 +other:uvrA6 +other:xylA5 -DE(gpt-proA)62 -F- -Lambda- -Rac-0 -araC14 -argE3(Oc) -galK2(Oc) -glnX44(AS) -hisG4(Oc) -kdgK51 -lacY1 -leuB6(Am) -mgl-51 -mtl-1 -qsr'-0 -rfbC1 -rpoS396(Am) -rpsL31(strR) -thiE1 -thr-1 -tsx-33 -xylA5

Condition differences:

no differences

other:UV-C

ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 3

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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ Howard-Flanders, P et al. (1966) Three loci in Escherichia coli K-12 that control the excision of pyrimidine dimers and certain other mutagen products from DNA. Genetics 53 1119-36 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 Lage, C et al. (2010) Differential survival of Escherichia coli uvrA, uvrB, and uvrC mutants to psoralen plus UV-A (PUVA): Evidence for uncoupled action of nucleotide excision repair to process DNA adducts. J. Photochem. Photobiol. B, Biol. 98 40-7 PubMed OMPwiki page
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