OMP ST:430 ! Escherichia coli K-12 RP487

Strain Summary

Strain Name	Escherichia coli K-12 RP487
Synonyms	RP477 metF
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	F- thr leu his metF DE(gal-attLambda) eda strA
Strain Reference	PMID:365356
Strain availability
Ancestry
Annotated phenotypes
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Phenotype Annotation

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Annotation ID	not	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:429		Reversing flagella rotation		Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:motility buffer	ECO:0000181	in vitro assay evidence	PMID:365356		Tethering assay
OMP_AN:436		OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:leucine (10^-2 M) medium:motility buffer	ECO:0000181	in vitro assay evidence	PMID:365356	CHEBI:25017 leucine	Tethering assay
OMP_AN:437		OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:acetate (10^-2 M) medium:motility buffer	ECO:0000181	in vitro assay evidence	PMID:365356	CHEBI:30089 acetate	Tethering assay
OMP_AN:438		OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:motility buffer medium:salicylate (10^-3 M)	ECO:0000181	in vitro assay evidence	PMID:365356	CHEBI:30762 salicylate	Tethering assay
OMP_AN:439		OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:indole (2.5 x 10^-4 M) medium:motility buffer	ECO:0000181	in vitro assay evidence	PMID:365356	CHEBI:35581 indole	Tethering assay
OMP_AN:440		OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:Co++ (10^-4 M) medium:motility buffer	ECO:0000181	in vitro assay evidence	PMID:365356	CHEBI:48828 Co++	Tethering assay
OMP_AN:471		OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:aspartate medium:motility buffer	ECO:0000181	in vitro assay evidence	PMID:365356		Tethering assay Decreased aspartate concentration 10^-5 M -> 0 M
OMP_AN:472		OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:motility buffer medium:serine	ECO:0000181	in vitro assay evidence	PMID:365356	CHEBI:17822 serine	Tethering assay Decreased serine concentration 10^-5 M -> 0 M
OMP_AN:539		OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:motility medium medium:phenol (5 mM)	ECO:0000181	in vitro assay evidence	PMID:3025180	CHEBI:15882 phenol	Tethered cell assay

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References

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