OMP ST:772 ! Escherichia coli K-12 AW405
Contents
Strain Summary
| Strain Name |
AW405 |
|---|---|
| Synonyms | |
| Taxon Information |
|
| Genotype |
Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsx-78 xylA5 |
| Strain Reference | |
| Strain availability | |
| Ancestry |
parent:AW330 |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | not | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:44 |
OMP:0000005 |
presence of cell motility |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
swim plate assay | |||
|
OMP_AN:45 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
||||
|
OMP_AN:46 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17115 serine |
capillary assay | ||
|
OMP_AN:102 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17306 maltose |
Temporal assay | ||
|
OMP_AN:105 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17053 aspartate |
Temporal assay | ||
|
OMP_AN:400 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
Temporal assay | |||
|
OMP_AN:401 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:28260 galactose |
Capillary assay | ||
|
OMP_AN:402 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:33942 ribose |
Capillary assay | ||
|
OMP_AN:403 |
OMP:0000053 |
presence of negative chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:30089 acetate |
Temporal assay | ||
|
OMP_AN:404 |
OMP:0000053 |
presence of negative chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:16150 benzoate |
Temporal assay | ||
|
OMP_AN:405 |
OMP:0000053 |
presence of negative chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:35581 indole |
Temporal assay | ||
|
OMP_AN:406 |
OMP:0000053 |
presence of negative chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:15603 leucine |
Temporal assay | ||
|
OMP_AN:407 |
OMP:0000053 |
presence of negative chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
Temporal assay | |||
|
OMP_AN:408 |
OMP:0000053 |
presence of negative chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:48828 Co(II) |
Temporal assay | ||
|
OMP_AN:421 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17115 serine |
Temporal assay | ||
|
OMP_AN:485 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
Capillary assay | |||
|
OMP_AN:486 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17115 serine |
Capillary assay | ||
|
OMP_AN:487 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:16857 threonine |
Capillary assay | ||
|
OMP_AN:488 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17196 asparagine |
Capillary assay | ||
|
OMP_AN:489 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17561 cysteine |
Capillary assay | ||
|
OMP_AN:490 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
Capillary assay | |||
|
OMP_AN:491 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
Capillary assay | |||
|
OMP_AN:492 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:16977 alanine |
Capillary assay | ||
|
OMP_AN:493 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:16643 methionine |
Capillary assay | ||
|
OMP_AN:504 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17115 serine |
Capillary assay | ||
|
OMP_AN:505 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
Capillary assay | |||
|
OMP_AN:506 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:504 Genotype differences: no differences Condition differences: medium:0.5 uM omega-conotoxin0 uM omega-conotoxin |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17115 serine |
Capillary assay | ||
|
OMP_AN:507 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:505 Genotype differences: no differences Condition differences: medium:0.5 uM omega-conotoxin0 uM omega-conotoxin |
|
ECO:0000181 |
in vitro assay evidence |
Capillary assay | |||
|
OMP_AN:508 |
OMP:0000052 |
presence of positive chemotaxis |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17115 serine |
Capillary assay | ||
|
OMP_AN:509 |
OMP:0007041 |
decreased positive chemotaxis |
Relative to: OMP_AN:508 Genotype differences: no differences Condition differences: medium:EDTA? |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:17115 serine |
Capillary assay | ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
- ↑ 2.0 2.1 Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page
- ↑ 3.0 3.1 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
- ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 Mesibov, R & Adler, J (1972) Chemotaxis toward amino acids in Escherichia coli. J. Bacteriol. 112 315-26 PubMed OMPwiki page
- ↑ 6.0 6.1 6.2 6.3 6.4 6.5 Tisa, LS et al. (1993) Inhibition of Escherichia coli chemotaxis by omega-conotoxin, a calcium ion channel blocker. J. Bacteriol. 175 1235-8 PubMed OMPwiki page
