OMP ST:816 ! Escherichia coli K-12 A593

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Revision as of 16:12, 6 July 2015 by Jyang (talk | contribs) (Table edited by Jyang via TableEdit)

Strain Summary

Strain Name

A593

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Taxon: K-12
  • NCBI Taxon ID: 83333
Genotype other:Lambda- other:fhuA21 other:glnX44(AS) other:lacY1 other:leuB6(Am) other:rfbC1 other:thiE1 other:thr-1 other:tolB2
Strain Reference
Source

CGSC

Ancestry

parent:Strain:Escherichia coli K-12 C600

Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:157

decreased sensitivity to colicin

Relative to:OMP_AN:133
Genotype differences:
+other:fhuA21 +other:glnX44(AS) +other:lacY1 +other:leuB6(Am) +other:rfbC1 +other:thr-1 +other:tolB2 -other:DE(gpt-lac)5-other:F'-other:ara-600-other:relA1-other:spoT1

-lac

-pro

Condition differences:
temperature:37C vs 42C
medium:LB agar vs TB or LB agar
  • other:colicin E1
  • temperature:37C
  • medium:LB agar

PMID:30010201[1]

UniProtKB:P02978 Colicin E1

OMP_AN:159

decreased sensitivity to colicin

Relative to:
Genotype differences:
Nothing to compare

Condition differences:
Nothing to compare
  • other:colicin E2
  • temperature:37C
  • medium:LB agar

PMID:30010201[1]

UniProtKB:P04419 Colicin E2


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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 1.2 Vlachos, NT et al. (2018) An automated independent workflow for the analysis of massively parallel sequence data from forensic SNP assays. Electrophoresis 39 2752-2756 PubMed OMPwiki page
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