OMP ST:1158 ! Escherichia coli K-12 JW5713
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW5713 |
|---|---|
| Synonyms |
JW5713-1 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 ubiC736(del)::kan |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:1074 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +ubiC736(del) -IN(rrnD-rrnE)1 Condition differences: no differences |
|
ECO:0005803 |
motility assay evidence |
||||
|
OMP_AN:36643 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27531 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28971) Ampicillin |
| ||
|
OMP_AN:36644 |
OMP:0007173 |
decreased resistance to host defense peptides |
Relative to: OMP_AN:27562 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:16130488) Cecropin B |
| ||
|
OMP_AN:36645 |
OMP:0007886 |
decreased resistance to a metal |
Relative to: OMP_AN:27578 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:53503) Cobalt stress-Co(II)Cl2 hexahydrate |
| ||
|
OMP_AN:36646 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27501 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:247956) Dibucaine |
| ||
|
OMP_AN:36647 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27555 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:6093162) Fosfomycin disodium salt |
| ||
|
OMP_AN:36648 |
OMP:0007173 |
decreased resistance to host defense peptides |
Relative to: OMP_AN:27563 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (UniProtKB:P33046) Indolicidin |
| ||
|
OMP_AN:36649 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27517 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:16760591) Nigericin sodium salt |
| ||
|
OMP_AN:36650 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27513 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8055) Phenazine methosulfate (PMS) |
| ||
|
OMP_AN:36651 |
OMP:0006040 |
decreased resistance to quinolone |
Relative to: OMP_AN:27543 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9287) Streptonigrin |
| ||
|
OMP_AN:36652 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27567 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28177) Theophylline anhydrous |
| ||
|
OMP_AN:36653 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27554 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:29699) Tunicamycin |
| ||
|
OMP_AN:36654 |
OMP:0006036 |
decreased resistance to macrolide |
Relative to: OMP_AN:27521 Genotype differences: +lacZ4787(del)( +ubiC736(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:6419898) Spiramycin |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Inoue, T et al. (2007) Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. J. Bacteriol. 189 950-7 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
e
o
- OMP:0006036 ! decreased resistance to macrolide
- OMP:0006040 ! decreased resistance to quinolone
- OMP:0006044 ! decreased resistance to beta-lactam
- OMP:0007092 ! decreased motility by swarming
- OMP:0007173 ! decreased resistance to antimicrobial peptide
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007886 ! decreased resistance to a metal
