OMP ST:1172 ! Escherichia coli K-12 JW5597

Strain Summary

Strain Name	Escherichia coli K-12 JW5597
Synonyms	JW5597-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 rffC741(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:1082		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rffC741(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:1135		OMP:0005324	altered cell motility by swimming	Relative to: OMP_AN:882 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rffC741(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:36464		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27594 Genotype differences: +lacZ4787(del)( +rffC741(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:SDS (CHEBI:8984) +EDTA (CHEBI:64758)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:64758 + CHEBI:8984) SDS (CHEBI:8984) +EDTA (CHEBI:64758)	chemical concentration= 0.5%/0.5mM %/0.5mM normalized fitness= -3.38
OMP_AN:36465		OMP:0007960	decreased population growth at low temperature	Relative to: OMP_AN:27620 Genotype differences: +lacZ4787(del)( +rffC741(del) -lacZ4787(del) Condition differences: temperature:20C medium37C medium	temperature:20C medium:LB agar medium:Low temperature	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072		chemical concentration= 20 C normalized fitness= -3.49
OMP_AN:36466		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27557 Genotype differences: +lacZ4787(del)( +rffC741(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:A22	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:2830968) A22	chemical concentration= 5 ug/ml normalized fitness= -3.99
OMP_AN:36467		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27552 Genotype differences: +lacZ4787(del)( +rffC741(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Azidothymidine	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:10110) Azidothymidine	chemical concentration= 2.5 ng/ml normalized fitness= -3.84
OMP_AN:36468		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27549 Genotype differences: +lacZ4787(del)( +rffC741(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:CHIR-090	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:134107 CID:11546620) CHIR-090	chemical concentration= 0.075 ug/ml normalized fitness= -3.98
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References

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