OMP ST:74219 ! Escherichia coli K-12 JW5290
Strain Summary
| Strain Name |
Escherichia coli K-12 JW5290 |
|---|---|
| Synonyms |
JW5290-1 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 ydjK773(del)::FRT-kan-FRT |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:35948 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27557 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:2830968) A22 |
| ||
|
OMP_AN:35949 |
OMP:0007926 |
increased anaerobic population growth |
Relative to: OMP_AN:27618 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
|
OMP_AN:35950 |
OMP:0006037 |
increased resistance to macrolide |
Relative to: OMP_AN:27518 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:2955) Azithromycin |
| ||
|
OMP_AN:35951 |
OMP:0007895 |
increased resistance to a surfactant |
Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3020) Benzalkonium chloride |
| ||
|
OMP_AN:35952 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27548 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:171741) Cerulenin |
| ||
|
OMP_AN:35953 |
OMP:0007250 |
increased resistance to a chemical |
Relative to: OMP_AN:27501 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:247956) Dibucaine |
| ||
|
OMP_AN:35954 |
OMP:0007913 |
increased resistance to a chelator |
Relative to: OMP_AN:27507 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:64758) EDTA disodium salt dihydrate |
| ||
|
OMP_AN:35955 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27537 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:51208) Mecillinam |
| ||
|
OMP_AN:35956 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27600 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
|
OMP_AN:35957 |
OMP:0007033 |
increased utilization of inorganic nitrogen source |
Relative to: OMP_AN:27610 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
|
OMP_AN:35958 |
OMP:0007250 |
increased resistance to a chemical |
Relative to: OMP_AN:27573 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8431) Procaine hydrochloride |
| ||
|
OMP_AN:35959 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27546 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8653) Pyocyanin |
| ||
|
OMP_AN:35960 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27554 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:29699) Tunicamycin |
| ||
|
OMP_AN:35961 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27566 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:9932) Vancomycin HCl hydrate |
| ||
|
OMP_AN:35962 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27560 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:16219032) Bacitracin Zinc Sulfate |
| ||
|
OMP_AN:35963 |
OMP:0006041 |
increased resistance to quinolone |
Relative to: OMP_AN:27539 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate |
| ||
|
OMP_AN:35964 |
OMP:0007912 |
decreased resistance to a chelator |
Relative to: OMP_AN:27508 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:30740) EGTA |
| ||
|
OMP_AN:35965 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27598 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride |
| ||
|
OMP_AN:35966 |
OMP:0007888 |
increased resistance to a metal |
Relative to: OMP_AN:27608 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride |
| ||
|
OMP_AN:35967 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27599 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O |
| ||
|
OMP_AN:35968 |
OMP:0007936 |
increased resistance to nutrient limitation |
Relative to: OMP_AN:27609 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O |
| ||
|
OMP_AN:35969 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27551 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28077) Rifampicin |
| ||
|
OMP_AN:35970 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27500 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:45924) Trimethoprim |
| ||
|
OMP_AN:35971 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27591 Genotype differences: +lacZ4787(del)( +ydjK773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:45924 + CHEBI:9331) Trimethoprim (CHEBI:45924) + Sulfamethizole (CHEBI:9331) |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 2.21 2.22 2.23 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed
o
- OMP:0006037 ! increased resistance to macrolide
- OMP:0006041 ! increased resistance to quinolone
- OMP:0006044 ! decreased resistance to beta-lactam
- OMP:0007033 ! increased utilization of inorganic nitrogen source
- OMP:0007074 ! increased growth factor requirement
- OMP:0007250 ! increased resistance to a chemical
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007888 ! increased resistance to a metal
- OMP:0007895 ! increased resistance to a surfactant
- OMP:0007912 ! decreased resistance to a chelator
- OMP:0007913 ! increased resistance to a chelator
- OMP:0007926 ! increased anaerobic population growth
- OMP:0007936 ! increased resistance to nutrient limitation
