OMP ST:1036 ! Escherichia coli K-12 JW4281

Strain Summary

Strain Name	Escherichia coli K-12 JW4281
Synonyms	JW4281-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 fimF786(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

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Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:35433		OMP:0007960	decreased population growth at low temperature	Relative to: OMP_AN:27620 Genotype differences: +lacZ4787(del)( +fimF786(del) -lacZ4787(del) Condition differences: temperature:20C medium37C medium	temperature:20C medium:LB agar medium:Low temperature	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072		chemical concentration= 20 C normalized fitness= -4.44
OMP_AN:35434		OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27534 Genotype differences: +lacZ4787(del)( +fimF786(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cefoxitin sodium hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3501) Cefoxitin sodium hydrate	chemical concentration= 0.5 ug/ml normalized fitness= -3.61
OMP_AN:35435		OMP:0007903	decreased resistance to bile acids	Relative to: OMP_AN:27585 Genotype differences: +lacZ4787(del)( +fimF786(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cholate sodium hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:23679061) Cholate sodium hydrate	chemical concentration= 2 % normalized fitness= -3.18
OMP_AN:35436		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27553 Genotype differences: +lacZ4787(del)( +fimF786(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Puromycin dihydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:8642) Puromycin dihydrochloride	chemical concentration= 5 ug/ml normalized fitness= 4
OMP_AN:35437		OMP:0006041	increased resistance to quinolone	Relative to: OMP_AN:27543 Genotype differences: +lacZ4787(del)( +fimF786(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Streptonigrin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:9287) Streptonigrin	chemical concentration= 0.5 ug/ml normalized fitness= 3.79
OMP_AN:948		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +fimF786(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336

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References

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