OMP ST:1056 ! Escherichia coli K-12 JW3882

Strain Summary

Strain Name	Escherichia coli K-12 JW3882
Synonyms	JW3882-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 cpxA771(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:968		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +cpxA771(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:34554		OMP:0007960	decreased population growth at low temperature	Relative to: OMP_AN:27620 Genotype differences: +lacZ4787(del)( +cpxA771(del) -lacZ4787(del) Condition differences: temperature:20C medium37C medium	temperature:20C medium:LB agar medium:Low temperature	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072		chemical concentration= 20 C normalized fitness= -6.37
OMP_AN:34555		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27557 Genotype differences: +lacZ4787(del)( +cpxA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:A22	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:2830968) A22	chemical concentration= 5 ug/ml normalized fitness= 3.72
OMP_AN:34556		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27575 Genotype differences: +lacZ4787(del)( +cpxA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Acriflavine (acriflavinium chloride)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:74728) Acriflavine (acriflavinium chloride)	chemical concentration= 2 ug/ml normalized fitness= -3.89
OMP_AN:34557		OMP:0007927	decreased anaerobic population growth	Relative to: OMP_AN:27618 Genotype differences: +lacZ4787(del)( +cpxA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Anaerobic	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072		normalized fitness= -4.09
OMP_AN:34558		OMP:0007250	increased resistance to a chemical	Relative to: OMP_AN:27514 Genotype differences: +lacZ4787(del)( +cpxA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Chlorpromazine hydrochloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3649) Chlorpromazine hydrochloride	chemical concentration= 6 uM normalized fitness= 3.21
OMP_AN:34559		OMP:0007886	decreased resistance to a metal	Relative to: OMP_AN:27579 Genotype differences: +lacZ4787(del)( +cpxA771(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Copper stress-CuCl2 dihydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:86318) Copper stress-CuCl2 dihydrate	chemical concentration= 4 mM (LB) normalized fitness= -3.52
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References

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