OMP ST:1030 ! Escherichia coli K-12 JW3607

Strain Summary

Strain Name	Escherichia coli K-12 JW3607
Synonyms	JW3607-2
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 rfaQ743(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:941		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rfaQ743(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:1150		OMP:0005324	altered cell motility by swimming	Relative to: OMP_AN:882 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rfaQ743(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:33888		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27594 Genotype differences: +lacZ4787(del)( +rfaQ743(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:SDS (CHEBI:8984) +EDTA (CHEBI:64758)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:64758 + CHEBI:8984) SDS (CHEBI:8984) +EDTA (CHEBI:64758)	chemical concentration= 0.5%/0.5mM %/0.5mM normalized fitness= -3.58
OMP_AN:33889		OMP:0007959	increased population growth at low temperature	Relative to: OMP_AN:27620 Genotype differences: +lacZ4787(del)( +rfaQ743(del) -lacZ4787(del) Condition differences: temperature:20C medium37C medium	temperature:20C medium:LB agar medium:Low temperature	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072		chemical concentration= 20 C normalized fitness= 4.04
OMP_AN:33890		OMP:0007954	decreased population growth at high temperature	Relative to: OMP_AN:27621 Genotype differences: +lacZ4787(del)( +rfaQ743(del) -lacZ4787(del) Condition differences: temperature:45C medium37C medium	temperature:45C medium:LB agar medium:High temperature	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072		chemical concentration= 45 C normalized fitness= -4.25
OMP_AN:33891		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27575 Genotype differences: +lacZ4787(del)( +rfaQ743(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Acriflavine (acriflavinium chloride)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:74728) Acriflavine (acriflavinium chloride)	chemical concentration= 2 ug/ml normalized fitness= -3.54
OMP_AN:33892		OMP:0006036	decreased resistance to macrolide	Relative to: OMP_AN:27518 Genotype differences: +lacZ4787(del)( +rfaQ743(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Azithromycin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:2955) Azithromycin	chemical concentration= 1 ug/ml normalized fitness= -3.54
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References

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