OMP ST:1295 ! Escherichia coli K-12 JW3594

Strain Summary

Strain Name	Escherichia coli K-12 JW3594
Synonyms	JW3594-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 rfaD731(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:1155		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rfaD731(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:1156		OMP:0007093	decreased cell motility by swimming	Relative to: OMP_AN:882 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +rfaD731(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:33756		OMP:0007954	decreased population growth at high temperature	Relative to: OMP_AN:27621 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: temperature:45C medium37C medium	temperature:45C medium:LB agar medium:High temperature	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072		chemical concentration= 45 C normalized fitness= -3.31
OMP_AN:33757		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27557 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:A22	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:2830968) A22	chemical concentration= 0.5 ug/ml normalized fitness= 4.46
OMP_AN:33758		OMP:0007896	decreased resistance to a surfactant	Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Benzalkonium chloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3020) Benzalkonium chloride	chemical concentration= 10 ug/ml normalized fitness= -8.12
OMP_AN:33759		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27571 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:CCCP (Carbonyl cyanide 3-chlorophenylhydrazone)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3259) CCCP (Carbonyl cyanide 3-chlorophenylhydrazone)	chemical concentration= 2 ug/ml normalized fitness= -6.32
OMP_AN:33760		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27548 Genotype differences: +lacZ4787(del)( +rfaD731(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cerulenin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:171741) Cerulenin	chemical concentration= 4 ug/ml normalized fitness= 3.64
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References

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