OMP ST:1288 ! Escherichia coli K-12 JW3161

Strain Summary

Strain Name	Escherichia coli K-12 JW3161
Synonyms	JW3161-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 mlaE724(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Notes

Gene mlaE referred to by its old name (yrbE) in PMID:17122336.

Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:1125		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +mlaE724(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:33103		OMP:0007896	decreased resistance to a surfactant	Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +mlaE724(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Benzalkonium chloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:3020) Benzalkonium chloride	chemical concentration= 25 ug/ml normalized fitness= -12.1
OMP_AN:33104		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27561 Genotype differences: +lacZ4787(del)( +mlaE724(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Bleomycin sulfate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:34582) Bleomycin sulfate	chemical concentration= 0.5 ug/ml normalized fitness= 3.68
OMP_AN:33105		OMP:0007903	decreased resistance to bile acids	Relative to: OMP_AN:27585 Genotype differences: +lacZ4787(del)( +mlaE724(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cholate sodium hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:23679061) Cholate sodium hydrate	chemical concentration= 2 % normalized fitness= -8.12
OMP_AN:33106		OMP:0007250	increased resistance to a chemical	Relative to: OMP_AN:27509 Genotype differences: +lacZ4787(del)( +mlaE724(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cisplatin-cis-Diamineplatinum(II) dichloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:27899) Cisplatin-cis-Diamineplatinum(II) dichloride	chemical concentration= 50 ug/ml normalized fitness= 3.39
OMP_AN:33107		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27501 Genotype differences: +lacZ4787(del)( +mlaE724(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Dibucaine	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:247956) Dibucaine	chemical concentration= 1.2 mM normalized fitness= -7.89
OMP_AN:33108		OMP:0006045	increased resistance to beta-lactam compound	Relative to: OMP_AN:27537 Genotype differences: +lacZ4787(del)( +mlaE724(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Mecillinam	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:51208) Mecillinam	chemical concentration= 0.06 ug/ml normalized fitness= 3.3
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References

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