OMP ST:72293 ! Escherichia coli K-12 JW1667

Strain Summary

Strain Name	Escherichia coli K-12 JW1667
Synonyms	JW1667-5
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 lpp-752(del)::FRT-kan-FRT
Strain Reference	PMID:16738554^[1] Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:30510	OMP:0007896	decreased resistance to a surfactant	Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +lpp-752(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Benzalkonium chloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CHEBI:3020) Benzalkonium chloride	chemical concentration= 25 ug/ml normalized fitness= -4.44
OMP_AN:30511	OMP:0007173	decreased resistance to host defense peptides	Relative to: OMP_AN:27562 Genotype differences: +lacZ4787(del)( +lpp-752(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cecropin B	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CID:16130488) Cecropin B	chemical concentration= 0.3 ug/ml normalized fitness= -5.13
OMP_AN:30512	OMP:0007903	decreased resistance to bile acids	Relative to: OMP_AN:27585 Genotype differences: +lacZ4787(del)( +lpp-752(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cholate sodium hydrate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[2]	towards some (CID:23679061) Cholate sodium hydrate	chemical concentration= 2 % normalized fitness= -12.2
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↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
↑ ^2.0 ^2.1 ^2.2 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page