OMP ST:1119 ! Escherichia coli K-12 JW1628

Strain Summary

Strain Name	Escherichia coli K-12 JW1628
Synonyms	JW1628-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 pdxY786(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:30457	OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27559 Genotype differences: +lacZ4787(del)( +pdxY786(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Actinomycin D	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[1]	towards some (CHEBI:27666 CID:457193) Actinomycin D	chemical concentration= 5 ug/ml normalized fitness= 3.47
OMP_AN:1035	OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +pdxY786(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336^[2]
OMP_AN:30458	OMP:0006044	decreased resistance to beta-lactam	Relative to: OMP_AN:27530 Genotype differences: +lacZ4787(del)( +pdxY786(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Amoxicillin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072^[1]	towards some (CHEBI:2676) Amoxicillin	chemical concentration= 1.5 ug/ml normalized fitness= -3.43
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↑ ^1.0 ^1.1 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
↑ Inoue, T et al. (2007) Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. J. Bacteriol. 189 950-7 PubMed OMPwiki page