OMP ST:6173 ! Escherichia coli K-12 JW0675

Strain Summary

Strain Name	Escherichia coli K-12 JW0675
Synonyms	JW0675-1
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 pgm-736(del)::kan
Strain Reference	Coli Genetic Stock Center
Strain availability	Coli Genetic Stock Center
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:1289		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:881 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +pgm-736(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:1290		OMP:0007093	decreased cell motility by swimming	Relative to: OMP_AN:882 Genotype differences: +DE(araD-araB)567 +DE(rhaD-rhaB)568 +hsdR514 +lacZ4787(del)( +pgm-736(del) -IN(rrnD-rrnE)1 Condition differences: no differences	temperature:33C medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:17122336
OMP_AN:29014		OMP:0007878	increased resistance to an antimicrobial agent	Relative to: OMP_AN:27557 Genotype differences: +lacZ4787(del)( +pgm-736(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:A22	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CID:2830968) A22	chemical concentration= 15 ug/ml normalized fitness= 3.71
OMP_AN:29015		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27575 Genotype differences: +lacZ4787(del)( +pgm-736(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Acriflavine (acriflavinium chloride)	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:74728) Acriflavine (acriflavinium chloride)	chemical concentration= 2 ug/ml normalized fitness= -4.74
OMP_AN:29016		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27552 Genotype differences: +lacZ4787(del)( +pgm-736(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Azidothymidine	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:10110) Azidothymidine	chemical concentration= 0.5 ng/ml normalized fitness= -3.8
OMP_AN:29017		OMP:0007879	decreased resistance to an antimicrobial agent	Relative to: OMP_AN:27548 Genotype differences: +lacZ4787(del)( +pgm-736(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Cerulenin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:171741) Cerulenin	chemical concentration= 4 ug/ml normalized fitness= -4.79
OMP_AN:29018		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27501 Genotype differences: +lacZ4787(del)( +pgm-736(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Dibucaine	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:247956) Dibucaine	chemical concentration= 1.2 mM normalized fitness= -3.66
OMP_AN:29019		OMP:0006037	increased resistance to macrolide	Relative to: OMP_AN:27520 Genotype differences: +lacZ4787(del)( +pgm-736(del) -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Erythromycin	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:42355) Erythromycin	chemical concentration= 0.1 ug/ml normalized fitness= 3.72
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References

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