OMP ST:71241 ! Escherichia coli K-12 JW0048
Contents
Strain Summary
Strain Name |
Escherichia coli K-12 JW0048 |
---|---|
Synonyms |
JW0048-1 |
Taxon Information |
|
Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 apaH761(del)::FRT-kan-FRT |
Strain Reference | |
Strain availability | |
Ancestry | |
Annotated phenotypes |
|
Notes
Phenotype Annotation
Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
---|---|---|---|---|---|---|---|---|---|---|
OMP_AN:27811 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27601 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:32954) Sodium Acetate anhydrous |
| ||
OMP_AN:27812 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27611 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:32954) Sodium Acetate anhydrous |
| ||
OMP_AN:27813 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27552 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:10110) Azidothymidine |
| ||
OMP_AN:27814 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27550 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:4883) Ethidium Bromide |
| ||
OMP_AN:27815 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27606 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:506227) N-Acetyl-D-glucosamine |
| ||
OMP_AN:27816 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27616 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:506227) N-Acetyl-D-glucosamine |
| ||
OMP_AN:27817 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27602 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:91431) D-(+) Glucosamine hydrochloride |
| ||
OMP_AN:27818 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27612 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:91431) D-(+) Glucosamine hydrochloride |
| ||
OMP_AN:27819 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27604 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:17754) Glycerol |
| ||
OMP_AN:27820 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27614 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:17754) Glycerol |
| ||
OMP_AN:27821 |
OMP:0007377 |
decreased resistance to an alkylating agent |
Relative to: OMP_AN:27502 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:25255) methyl methanesulfonate (MMS) |
| ||
OMP_AN:27822 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27605 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:23615261) D-(+) Maltose monohydrate |
| ||
OMP_AN:27823 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27615 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:23615261) D-(+) Maltose monohydrate |
| ||
OMP_AN:27824 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27600 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
OMP_AN:27825 |
OMP:0007032 |
decreased utilization of inorganic nitrogen source |
Relative to: OMP_AN:27610 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
OMP_AN:27826 |
OMP:0007888 |
increased resistance to a metal |
Relative to: OMP_AN:27580 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate |
| ||
OMP_AN:27827 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27569 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:16236) EtOH |
| ||
OMP_AN:27828 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27598 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride |
| ||
OMP_AN:27829 |
OMP:0007886 |
decreased resistance to a metal |
Relative to: OMP_AN:27608 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride |
| ||
OMP_AN:27830 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27599 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O |
| ||
OMP_AN:27831 |
OMP:0007937 |
decreased resistance to nutrient limitation |
Relative to: OMP_AN:27609 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O |
| ||
OMP_AN:27832 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27591 Genotype differences: +lacZ4787(del)( +apaH761(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:45924 + CHEBI:9331) Trimethoprim (CHEBI:45924) + Sulfamethizole (CHEBI:9331) |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 2.21 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
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- OMP:0007032 ! decreased utilization of inorganic nitrogen source
- OMP:0007070 ! decreased organic carbon source utilization
- OMP:0007075 ! decreased growth factor requirement
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007377 ! decreased resistance to alkylating agent
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007886 ! decreased resistance to a metal
- OMP:0007888 ! increased resistance to a metal
- OMP:0007937 ! decreased resistance to nutrient limitation