OMP ST:74710 ! Escherichia coli K-12 CAG41245
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 CAG41245 |
|---|---|
| Synonyms | |
| Taxon Information |
|
| Genotype |
F- Lambda- rph-1 Lamda(rpoHP3::lacZ) lacX74(del) yraP(del)::Cm CmR |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
In order to confirm that the yraP(del) deletion was responsible for the sensitivity to certain antimicrobial agents, a plasmid carrying the yraP gene was inserted into this strain. The two transformants, CAG41511 and CAG41513, were tested and the EOP experiment was repeated using these transformants. After introducing the plasmids, the transformants displayed the wild-type phenotype.
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:27326 |
OMP:0007897 |
abolished resistance to a surfactant |
Relative to: OMP_AN:27317 Genotype differences: +yraP(del) +CmR Condition differences: no differences |
|
ECO:0001165 |
colony counting evidence used in manual assertion |
CHEBI:8984 SDS |
Table 5; EOP=4E-7 | ||
|
OMP_AN:27327 |
NOT |
OMP:0007216 |
altered rifamycin resistance |
Relative to: OMP_AN:27318 Genotype differences: +yraP(del) +CmR Condition differences: no differences |
|
ECO:0001165 |
colony counting evidence used in manual assertion |
CHEBI:28077 rifampicin |
Table 5; EOP=0.6 | |
|
OMP_AN:27328 |
NOT |
OMP:0007134 |
altered resistance to an antimicrobial agent |
Relative to: OMP_AN:27319 Genotype differences: +yraP(del) +CmR Condition differences: no differences |
|
ECO:0001165 |
colony counting evidence used in manual assertion |
CHEBI:28368 novobiocin |
Table 5; EOP=0.8 | |
|
OMP_AN:27337 |
NOT |
OMP:0007901 |
altered resistance to bile acids |
Relative to: OMP_AN:27332 Genotype differences: +yraP(del) +CmR Condition differences: no differences |
|
ECO:0001165 |
colony counting evidence used in manual assertion |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ 1.0 1.1 1.2 1.3 Onufryk, C et al. (2005) Characterization of six lipoproteins in the sigmaE regulon. J. Bacteriol. 187 4552-61 PubMed OMPwiki page
- ↑ Vincent, DR et al. (1992) Effect of PCB and DES on rat monoamine oxidase, acetylcholinesterase, testosterone, and estradiol ontogeny. Bull Environ Contam Toxicol 48 884-93 PubMed OMPwiki page
