OMP ST:4564 ! Schizosaccharomyces pombe ubr1delta

From OMPwiki
Revision as of 13:39, 14 June 2018 by Sandyl 27 (talk | contribs) (Table edited by Sandyl 27 via TableEdit)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)

Strain Summary

Strain Name

Schizosaccharomyces pombe ubr1delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: ubr1delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 ubr1delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes



Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:5527

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028


Genotype differences:

+ubr1delta -h+/h+


Condition differences:

no differences

PMID:20473289[1]

OMP_AN:11120

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028


Genotype differences:

+ubr1delta -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:13929

OMP:0007736

increased septation index

Relative to: OMP_AN:1028


Genotype differences:

+ubr1delta -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:14438

OMP:0007747

altered actin cytoskeleton morphology during vegetative growth

Relative to: OMP_AN:1028


Genotype differences:

+ubr1delta -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15082

OMP:0007102

more rounded shape

Relative to: OMP_AN:1028


Genotype differences:

+ubr1delta -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15110

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028


Genotype differences:

+ubr1delta -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:22319

OMP:0007765

altered actin cortical patch localization

Relative to: OMP_AN:1028


Genotype differences:

+ubr1delta -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:22331

OMP:0007761

altered microtubule cytoskeleton

Relative to: OMP_AN:1028


Genotype differences:

+ubr1delta -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:26696

OMP:0007782

Relative to: OMP_AN:1028


Genotype differences:

+ubr1delta -h+/h+


Condition differences:

other:hydroxyurea? temperature:?25-32C

other:hydroxyurea

ECO:0001098

microscopy evidence

PMID:23697806[2]

CHEBI:44423 hydroxyurea

has_penetrance: FYPO_EXT:0000002 medium



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page