Difference between revisions of "OMP ST:2574 ! Schizosaccharomyces pombe ssu72delta"

From OMPwiki
(Table edited by Sandyl 27 via TableEdit)
(Table edited by Sandyl 27 via TableEdit)
Line 74: Line 74:
 
OMP:0007460
 
OMP:0007460
 
|
 
|
−
viable cell
+
viable vegetative cell population
 
|
 
|
 
Relative to: OMP_AN:1028
 
Relative to: OMP_AN:1028
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32ssu72delta -leu1-32/leu1-32 -h+/h+
+
+ssu72delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
Line 107: Line 107:
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32ssu72delta -leu1-32/leu1-32 -h+/h+
+
+ssu72delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
Line 113: Line 113:
  
 
|
 
|
−
 
+
ECO:0001098
 
|
 
|
−
 
+
microscopy evidence
 
|
 
|
 
PMID:23697806
 
PMID:23697806
Line 124: Line 124:
 
|-  
 
|-  
 
|
 
|
−
OMP_AN:13513
+
OMP_AN:13514
 
|
 
|
  
Line 135: Line 135:
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32ssu72delta -leu1-32/leu1-32 -h+/h+
+
+ssu72delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
Line 152: Line 152:
 
|-  
 
|-  
 
|
 
|
−
OMP_AN:13514
+
OMP_AN:13949
 
|
 
|
  
 
|
 
|
−
OMP:0007728
+
OMP:0007707
 
|
 
|
−
altered mitotic cell cycle
+
increased vegetative cell length
 
|
 
|
 
Relative to: OMP_AN:1028
 
Relative to: OMP_AN:1028
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32ssu72delta -leu1-32/leu1-32 -h+/h+
+
+ssu72delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
Line 180: Line 180:
 
|-  
 
|-  
 
|
 
|
−
OMP_AN:13949
+
OMP_AN:13980
 
|
 
|
  
 
|
 
|
−
OMP:0007707
+
OMP:0007708
 
|
 
|
−
increased vegetative cell length
+
altered vegetative cell shape
 
|
 
|
 
Relative to: OMP_AN:1028
 
Relative to: OMP_AN:1028
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32ssu72delta -leu1-32/leu1-32 -h+/h+
+
+ssu72delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
Line 208: Line 208:
 
|-  
 
|-  
 
|
 
|
−
OMP_AN:13980
+
OMP_AN:14439
 
|
 
|
  
 
|
 
|
−
OMP:0007708
+
OMP:0007165
 
|
 
|
−
altered vegetative cell shape
+
altered septation phenotype
 
|
 
|
 
Relative to: OMP_AN:1028
 
Relative to: OMP_AN:1028
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32ssu72delta -leu1-32/leu1-32 -h+/h+
+
+ssu72delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences

Revision as of 12:34, 11 January 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe ssu72delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: ssu72delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 ssu72delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:3022

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+ssu72delta -h+/h+

Condition differences:

no differences

PMID:20473289[1]

OMP_AN:9798

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+ssu72delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:13514

OMP:0007728

altered mitotic cell cycle

Relative to: OMP_AN:1028

Genotype differences:

+ssu72delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:13949

OMP:0007707

increased vegetative cell length

Relative to: OMP_AN:1028

Genotype differences:

+ssu72delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:13980

OMP:0007708

altered vegetative cell shape

Relative to: OMP_AN:1028

Genotype differences:

+ssu72delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:14439

OMP:0007165

altered septation phenotype

Relative to: OMP_AN:1028

Genotype differences:

+ssu72delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 2.3 2.4 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:2574_!_Schizosaccharomyces_pombe_ssu72delta&oldid=67788"