Difference between revisions of "OMP ST:6326 ! Escherichia coli UPEC CFT073"
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+ | |- | ||
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+ | OMP_AN:7523 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0007092 | ||
+ | | | ||
+ | decreased cell motility by swarming | ||
+ | | | ||
+ | Relative to: OMP_AN:7522 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | no differences | ||
+ | <hr>Condition differences:<br> | ||
+ | medium:cPACs (0.1 mg/mL)? | ||
+ | | | ||
+ | *temperature:37C | ||
+ | *medium:cPACs (0.1 mg/mL) | ||
+ | *medium:swarming motility medium | ||
+ | | | ||
+ | ECO:0005803 | ||
+ | | | ||
+ | motility assay evidence | ||
+ | | | ||
+ | PMID:21821749 | ||
+ | | | ||
+ | CHEBI:26267 cranberry-derived proanthocyanidins (cPACs) | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | OMP_AN:7524 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0006167 | ||
+ | | | ||
+ | abolished cell motility by swarming | ||
+ | | | ||
+ | Relative to: OMP_AN:7522 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | no differences | ||
+ | <hr>Condition differences:<br> | ||
+ | medium:≥ CP (10 mg/mL)? | ||
+ | | | ||
+ | *temperature:37C | ||
+ | *medium:swarming motility medium | ||
+ | *medium:≥ CP (10 mg/mL) | ||
+ | | | ||
+ | ECO:0005803 | ||
+ | | | ||
+ | motility assay evidence | ||
+ | | | ||
+ | PMID:21821749 | ||
+ | | | ||
+ | [https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi NCBI Taxonomy ID:13750 cranberry powder (CP)] | ||
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Revision as of 14:27, 8 November 2016
Contents
Strain Summary
Strain Name |
Escherichia coli UPEC CFT073 |
---|---|
Synonyms | |
Taxon Information |
|
Genotype | |
Strain Reference | |
Strain availability | |
Ancestry | |
Annotated phenotypes |
|
Notes
Phenotype Annotation
Annotation ID | not | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
---|---|---|---|---|---|---|---|---|---|---|
OMP_AN:7515 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000049 |
reporter gene assay evidence |
||||
OMP_AN:7516 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7515 Genotype differences: no differences Condition differences: medium:cPACs (0.1 mg/mL)? |
|
ECO:0000049 |
reporter gene assay evidence |
UniProtKB:A0A0H2VAE3 CHEBI:26267 cranberry-derived proanthocyanidins (cPACs) |
|||
OMP_AN:7517 |
OMP:0000029 |
presence of flagellum |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005033 |
electron microscopy evidence |
||||
OMP_AN:7518 |
OMP:0000215 |
decreased number of flagella |
Relative to: OMP_AN:7517 Genotype differences: no differences Condition differences: medium:CP (10 mg/mL)? |
|
ECO:0005033 |
electron microscopy evidence |
||||
OMP_AN:7519 |
OMP:0000111 |
presence of cell motility by swimming |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005803 |
motility assay evidence |
||||
OMP_AN:7520 |
OMP:0007093 |
decreased cell motility by swimming |
Relative to: OMP_AN:7519 Genotype differences: no differences Condition differences: medium:cPACs (0.1 mg/mL)? |
|
ECO:0005803 |
motility assay evidence |
CHEBI:26267 cranberry-derived proanthocyanidins (cPACs) |
|||
OMP_AN:7521 |
OMP:0006100 |
abolished cell motility by swimming |
Relative to: OMP_AN:7519 Genotype differences: no differences Condition differences: medium:? CP (10 mg/mL)? |
|
ECO:0005803 |
motility assay evidence |
||||
OMP_AN:7522 |
OMP:0000067 |
presence of cell motility by swarming |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005803 |
motility assay evidence |
||||
OMP_AN:7523 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:7522 Genotype differences: no differences Condition differences: medium:cPACs (0.1 mg/mL)? |
|
ECO:0005803 |
motility assay evidence |
CHEBI:26267 cranberry-derived proanthocyanidins (cPACs) |
|||
OMP_AN:7524 |
OMP:0006167 |
abolished cell motility by swarming |
Relative to: OMP_AN:7522 Genotype differences: no differences Condition differences: medium:≥ CP (10 mg/mL)? |
|
ECO:0005803 |
motility assay evidence |
| |||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
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- OMP:0000029 ! presence of flagellum
- OMP:0000067 ! presence of motility by swarming
- OMP:0000111 ! presence of motility by swimming
- OMP:0000215 ! decreased number of flagella
- OMP:0000253 ! gene expression phenotype
- OMP:0000268 ! decreased gene expression
- OMP:0006100 ! abolished motility by swimming
- OMP:0006167 ! abolished motility by swarming
- OMP:0007092 ! decreased motility by swarming
- OMP:0007093 ! decreased cell motility by swimming